Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1494 |
Symbol | |
ID | 7386461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1251964 |
End bp | 1252827 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643650869 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_002549074 |
Protein GI | 222148117 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGGTA TCATTCTAGC CGGTGGCAGC GGCACCCGCC TGCATCCCAT GACGCTAGTC ACCTCCAAGC AGCTCATGCC TGTCTATGAC AAGCCGATGA TCTATTATCC GCTCTCGACG CTGATGCTGG CCGGGATTCG CGATATCCTG ATCATTTCGA CACCGAAGGA TCTGCCGAAT TTTCAAAGCC TGCTGGGCGA TGGGTCGAAA TGGGGGATTT CGTTGACCTA TGCCGAGCAG CCGTCACCGG ATGGCCTGGC GCAGGCCTAT ATTATCGGCG CGGATTTCGT CGGCTCTAAT CCGTCTTGTT TGATCCTCGG CGACAATATT TTCTATGGCC ATGGTGTCAA CGACCTGTTC AGAAGTGCTG TGGCACGCAA TGACGGGGCA ACCGTATTTG CCTATCACGT CAATGATCCA GAACGCTATG GCGTTGTGGA ATTCGACAAG GACATGAAGG CGATTTCGAT CGAGGAAAAG CCGCCAACGC CGCGGTCGAG CTGGGCCGTG ACCGGGCTTT ACTTCTACGA CAAGGATGTC GTGGATATCG CCGCAAACCT CAAGCCATCG GCGCGTGGCG AGCTGGAAAT CACCGACGTC AACCGGGTCT ATCTGGAACG CGGCCGGCTT AATGTCGAGA AAATGGGCCG TGGCTATGCG TGGCTGGATA CCGGCACCCC CGACAGTCTG CTGGATGCCT CGGAATTCGT TGCCACGCTG GAACGCCGTC AGGGCTTCAA GATTTCCTGC CCGGAAGAGA TCGCCTATCG GCTCGGTTTC ATCGACGCTC AGCAGTTGGA GGCGCTCGGC CTGCAATATG GCAAGAGCGC TTATGGGCAA TATCTGCTGA AAAAAGTGCT CTAA
|
Protein sequence | MKGIILAGGS GTRLHPMTLV TSKQLMPVYD KPMIYYPLST LMLAGIRDIL IISTPKDLPN FQSLLGDGSK WGISLTYAEQ PSPDGLAQAY IIGADFVGSN PSCLILGDNI FYGHGVNDLF RSAVARNDGA TVFAYHVNDP ERYGVVEFDK DMKAISIEEK PPTPRSSWAV TGLYFYDKDV VDIAANLKPS ARGELEITDV NRVYLERGRL NVEKMGRGYA WLDTGTPDSL LDASEFVATL ERRQGFKISC PEEIAYRLGF IDAQQLEALG LQYGKSAYGQ YLLKKVL
|
| |