| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1493 |
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| Symbol | rfbD |
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| ID | 7386460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1250981 |
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| End bp | 1251886 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650868 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_002549073 |
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| Protein GI | 222148116 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGGCG TGAAGCGCTA TCTGGTGACG GGCCTAGCCG GACAGGTCGT GCAGTCGCTG
CTTGAGAAAG CCAGTGATCG CAAGGATATC GACCTTGTCG CCCTGGGTCG GCCACAGCTT
GATCTGGCCG ATCCCGCGAC GATTGAAGCG GCTGTGTTGG CCGCGAAACC CGACCTGATT
ATTTCGGCTG CCGCTTATAC CGCGGTCGAC CAGGCCGAAA CCGACGAGGC CACGGCCTTT
ACGGTCAATG GCGAAGGGCC GGGGGAATTG GCGCGGGTTG CCAAGGCGCT GGATATCCCG
ATCATCCATA TCTCGACCGA TTATGTCTTC GATGGCAGCA AGGCTTCGCC CTATAACGAG
GCCGATCCGG TTGCGCCGCT TGGCGTCTAT GGCCGCAGCA AGCTGGAAGG CGAGCGCCGG
GTGGCGGCTG AAACCGATAA CCACGCGATC CTGCGCACGG CCTGGGTCTA TAGCCCGTTC
GGCAAGAATT TTCTGCTGAC CATGTTGCGG CTGGCTGAAA CCCGCGATGA ACTGGGCGTG
GTGGCCGACC AGATCGGCAA TCCGACCTCG GCGCTCGATA TTGCCGATGC GGTGTTGAAG
GTGGCTGATA ACCTGCTGTC GTCCAAGGCC GCCGATCTGC GCGGCACGTT CCATATGACG
GGAACGGGAG AGGCGAGCTG GGCGGAGTTT GCAAGGGAGA TCTTCAGGCT GTCGGCTGAG
CAAAACGACC CTTCGGCCAA AGTCAATCCA ATCCCGGCCA GCGCCTACCC GACGCCCGCC
AAACGGCCTG CGAATTCCCG GCTGGATTGC GCCAAACTGG CCAGAGTTCA TGCTATCGAT
ATCCCCGATT GGCGCGTATC GACGCAACTG GTCATCGACC GGTTACGCCG ACCAGCCGCA
GTTTAG
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| Protein sequence | MSGVKRYLVT GLAGQVVQSL LEKASDRKDI DLVALGRPQL DLADPATIEA AVLAAKPDLI
ISAAAYTAVD QAETDEATAF TVNGEGPGEL ARVAKALDIP IIHISTDYVF DGSKASPYNE
ADPVAPLGVY GRSKLEGERR VAAETDNHAI LRTAWVYSPF GKNFLLTMLR LAETRDELGV
VADQIGNPTS ALDIADAVLK VADNLLSSKA ADLRGTFHMT GTGEASWAEF AREIFRLSAE
QNDPSAKVNP IPASAYPTPA KRPANSRLDC AKLARVHAID IPDWRVSTQL VIDRLRRPAA
V
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