Gene Avi_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1467 
Symbol 
ID7386440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1231136 
End bp1231891 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content59% 
IMG OID643650848 
Producthypothetical protein 
Protein accessionYP_002549053 
Protein GI222148096 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGAC GTTTTGCCCT GACCGTGACA CCGGACGAGA TCGTGGAGGC CTTTGGTCTG 
CACGAACTTG AAGCCTTTCC GCCCCGGTTC AATATTGCTC CGACCCAGCC GATTCTGACG
GTTGGCAATG GGGAGGTGCC GATGGTGGGT AGCAACTTGC CGAGCAGGCG GGCGCTGCTG
GTGCGCTGGG GTTTTCTGCC CGGCTGGGTG AAAGACCCGA GTGATTTTCC ACTGCTGATC
AATGCGCGCT CTGAAACGGC GCAAACGAAG GCGTCGTTTC GCGGTGCCAT GCGCCATCGC
CGTGTTTTGA TCCCGGCCTC CGGCTTTTAC GAATGGTATC GGCCAGCAAA GGAAAGCGGT
GAAAAACCGA AGGCTTACTG GATCCGCCCC ACCCAGGGCG GTATTGTCGC GTTCGGTGGT
CTGGTCGAAA CCTTTGCCGC CGCTGATGGA TCTGAAATCG ATACCGGCGC CATCCTGACC
ACCAGTGCCA ATCGCTCCAT TCGAGCGATC CATGACCGCA TGCCTGTCGT GATCGGCCCG
GAGGATTTCG AGCGTTGGCT GGATTGCAAG CGCCAGGAGC CACGCCATGT CGCTGATCTG
TTGAAACCGG CAGGCGAGGA CATGTTCGAA GCCATTCCGG TTTCCGACAA GGTCAACAAG
GTCGCCAATA CCGGCCCGGA TGTGCAGGTC CGCGTCGAAA ACCCGATGCC GAAAGCCGAG
ACACAATCGC CTTCGGAACA GCTATCGCTG TTTTGA
 
Protein sequence
MCGRFALTVT PDEIVEAFGL HELEAFPPRF NIAPTQPILT VGNGEVPMVG SNLPSRRALL 
VRWGFLPGWV KDPSDFPLLI NARSETAQTK ASFRGAMRHR RVLIPASGFY EWYRPAKESG
EKPKAYWIRP TQGGIVAFGG LVETFAAADG SEIDTGAILT TSANRSIRAI HDRMPVVIGP
EDFERWLDCK RQEPRHVADL LKPAGEDMFE AIPVSDKVNK VANTGPDVQV RVENPMPKAE
TQSPSEQLSL F