| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1443 |
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| Symbol | |
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| ID | 7386422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1215504 |
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| End bp | 1217744 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650830 |
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| Product | GTP pyrophosphohydrolases/synthetases RelA/SpoT family |
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| Protein accession | YP_002549035 |
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| Protein GI | 222148078 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGGC AGTATGAGCT CGTGGAGCGG GTACAGAAGT ACAAGCCCGA TGCCAACGAA
GCATTGCTCA ACAAGGCCTA TGTCTACGCC ATGCAGAAAC ATGGCCAGCA GAAGCGAGCC
AGCGGCGATC CCTATATTTC CCATCCGCTG GAAGTGGCCG CCATCCTCAC CGAAATGCAT
CTGGACGAGT CGACTATCGC GGTTGCCCTC CTGCATGACA CGATCGAGGA TACCACGGCG
ACCAGGGCCG AAATCGACGA ATTGTTCGGC GAGGATATCG GCCGGCTCGT CGAAGGCCTG
ACCAAGCTCA AGAAACTCGA CCTCGTTACC AAGAAAGCCA AGCAGGCCGA AAACCTGCGC
AAGCTGCTGC TGGCGATTTC CGACGATGTG CGGGTTCTGC TGGTCAAGCT GGCTGACCGC
CTGCACAATA TGCGCACATT GGAGCATATG CGCCCCGACA AGCGCGCCCG GATTTCCGAG
GAAACCATGG AAATCTATGC GCCGCTGGCC GGTCGCATGG GCATGCAGGA CATGCGCGAC
GAGCTGGAGG ATCTGTCCTT CCGCTATATC AATCCCGAAG CTTACGAGAC TGTTACAAAG
CGGCTGGAAG AGCTTTCCCG GCGCAACGAA GGGCTGATCA AGAAGATCGA AGACGAATTG
AGCGAACTGT TGGTCGCCAA TGGCCTGCTC CAGGCCTCGG TGAAGGGGCG CCAGAAGAAA
CCCTATTCGG TGTTTCGCAA GATGCAGTCC AAATCGCTGT CCTTCGAGCA GCTTTCGGAT
GTCTACGGCT TTCGCATTCT GGTCGATGGC GTTGCGGCCT GCTATCGGGC GCTCGGCATT
GTCCATACCC GCTGGCGGGT GGTGCCTGGC CGGTTCAAGG ACTATATCTC GACGCCGAAG
CAGAATGATT ACCGGTCGCT GCACACCACC ATCGTCGGCC CGTCGCGCCA GCGTATCGAG
TTGCAGATCC GCACCCACCG CATGCATGAA ATCGCCGAGT ACGGCATCGC CGCCCACGCG
CTCTACAAGG ATGGCGAGGG GGGGGGCGAA GGCGAGCTGC TGTCGCGCGA AAGCAATGCT
TATTCCTGGC TGCGTCATAC CATCGAGGCT CTGGCGGAAG CCAACAATCC GGAAGAGTTT
CTTGAGCACA CCAAGCTGGA ACTGTTCCAG GACCAGGTCT TCTGTTTCAC TCCGAAGGGC
AAGTTGATCG CCCTGCCGCG CGGCGCCACG CCGATCGACT TTGCCTATGC CGTTCATACC
AATATCGGCG ATACCACCGT CGGCGCCAAG ATCAATGGCC GGATCATGCC GCTGGTCACC
CGTCTGGCCA ATGGCGACGA GGTGGAGATC ATTCGCTCCG GCGTGCAGGT GCCGCCGGCG
GCCTGGGAAG AGATCGTCGT CACGGGCAAG GCCCGCGCCG CCATCCGCCG GGCCACCCGC
ATGGCGATCC GCAAGCAATA TTCCGGCCTC GGCTACCGAA TCCTCGAGCG CACGTTCGAG
CGTGCCGCTA AGACCTTTTC CCGCGAGATC CTGAAACCCG TTCTGCACCG ACTGGGCCAT
AAGGATGTCG AGGACGCCAT CGCGGCAGTC GGTCGCGGCG AAGTGTCTTC GCTTGATGTG
CTGCGCGCCG TATTCCCTGA TTACCAGGAC GAGCGTGTTA CGGTAAAGCC TGCCATGGAC
GATGGCTGGT TCAATATGCG CTCGGCCAGC GGCATGATGT TCAAGCTGCC GCAAGGCAAG
AAGGCAACTG ACGCCGCAAA GCCTGCCGAT GGCAGTCTTG CGGAGGAGTT GGATCCACTG
CCGATCCGAG GGCTCGCTGG TAATCTCGAA GTGCATTTCT CCGCAGCCGG TGCCGTTCCC
GGCGACCGGA TTGTCGGCAT CATGGAAGAC GGCAAGGGGA TCATCATCTA TCCGATCCAG
GCGTCTGCCT TGCAGAAATA CGATGATGAG CCGGAACGCT GGATCGACGT CCGCTGGGAT
CTGGATGAGG CCAACAAATC GCGCTTCCAT TCCCGCATCC TTATCAATGC CATCAACGAG
CCGGGTACGC TGGCCAAGGT GGCGCAACTG ATTGCCGGGC TGGACATCAA TATCCGGCTT
CTGTCCATGA TGCGCGTCGC TGCCGATTTC ACCGAAATGG CCTTCGATCT GGATGTCTGG
GATCTGCGAC AGCTCAACCA GCTTTTGTCG CAGCTGAAGG AGCTGGATTG CGTGGCAACC
GCCAAGCGGG TCTATGACTG A
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| Protein sequence | MMRQYELVER VQKYKPDANE ALLNKAYVYA MQKHGQQKRA SGDPYISHPL EVAAILTEMH
LDESTIAVAL LHDTIEDTTA TRAEIDELFG EDIGRLVEGL TKLKKLDLVT KKAKQAENLR
KLLLAISDDV RVLLVKLADR LHNMRTLEHM RPDKRARISE ETMEIYAPLA GRMGMQDMRD
ELEDLSFRYI NPEAYETVTK RLEELSRRNE GLIKKIEDEL SELLVANGLL QASVKGRQKK
PYSVFRKMQS KSLSFEQLSD VYGFRILVDG VAACYRALGI VHTRWRVVPG RFKDYISTPK
QNDYRSLHTT IVGPSRQRIE LQIRTHRMHE IAEYGIAAHA LYKDGEGGGE GELLSRESNA
YSWLRHTIEA LAEANNPEEF LEHTKLELFQ DQVFCFTPKG KLIALPRGAT PIDFAYAVHT
NIGDTTVGAK INGRIMPLVT RLANGDEVEI IRSGVQVPPA AWEEIVVTGK ARAAIRRATR
MAIRKQYSGL GYRILERTFE RAAKTFSREI LKPVLHRLGH KDVEDAIAAV GRGEVSSLDV
LRAVFPDYQD ERVTVKPAMD DGWFNMRSAS GMMFKLPQGK KATDAAKPAD GSLAEELDPL
PIRGLAGNLE VHFSAAGAVP GDRIVGIMED GKGIIIYPIQ ASALQKYDDE PERWIDVRWD
LDEANKSRFH SRILINAINE PGTLAKVAQL IAGLDINIRL LSMMRVAADF TEMAFDLDVW
DLRQLNQLLS QLKELDCVAT AKRVYD
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