| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1441 |
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| Symbol | rpoZ |
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| ID | 7386421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1214947 |
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| End bp | 1215345 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650829 |
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| Product | DNA-directed RNA polymerase subunit omega |
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| Protein accession | YP_002549034 |
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| Protein GI | 222148077 |
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| COG category | [K] Transcription |
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| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
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| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGCG TCACCGTGGA AGATTGCATC GACAAGGTCG ATAACCGTTT CGAACTGGTT
CTGCTGGCAA GCCATCGCGC CCGTCAGATC TCCCAGGGCG CTCAGATCAC CATCGACCGC
GACAATGACA AGAATCCTGT CGTTGCCCTG CGCGAAATTG CTGACGAGAC CCTGTCGCCT
GATGATCTGA AAGAAGATCT GATCCATTCT CTGCAAAAGC ATGTCGAAGT GGACGAGCCG
GAACAAGATG CTGCCTCCAT TGCCGAAGGC CAGCTGACCA GCGGCTCGCA AGACGAGGAC
GAAATGCCGG AAACCGTAGC CTTCGACCAG ATGTCGGAAG AAGAGCTGCT GGCCGGCATC
GAGGGCCTTG TCCCGCCGGA AAAGAGCGAC GATTACTGA
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| Protein sequence | MARVTVEDCI DKVDNRFELV LLASHRARQI SQGAQITIDR DNDKNPVVAL REIADETLSP
DDLKEDLIHS LQKHVEVDEP EQDAASIAEG QLTSGSQDED EMPETVAFDQ MSEEELLAGI
EGLVPPEKSD DY
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