Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1434 |
Symbol | smpB |
ID | 7386417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1209556 |
End bp | 1210032 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643650825 |
Product | SsrA-binding protein |
Protein accession | YP_002549030 |
Protein GI | 222148073 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.373269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACCCA GAGGCAGCCA GCGCACCGTA AACAAGATCG TCGCGGAAAA CCGCAAGGCG CGGTTTAACT ATGAGATCAT CGATACCTAC GAGGCTGGCA TCATGCTGAC CGGCACGGAG GTCAAGTCTC TGCGTGAAGG CAAGGCCAAT ATTGCCGAAT CCTATGCTTC GGACGAGGGT GAGGAAATCT GGCTGATCAA TTCGCATCTG CCGGAATATC TTCAGGCCAA CCGTTTCAAC CATGAACCGC GCCGTCGCCG CAAATTGCTG CTCAACAAGC GCGAGATCAA CCGGCTGCGC GTTGCCATCA ATCGCGAAGG CATGACGCTG GTGCCGTTGA AAATCTATTT CAACGAAAAA GGCCGCGCCA AGCTGGAACT GGCCTTGGCC AAGGGCAAGA AATTGCATGA CAAGCGCGAG ACCGAGAAGG AACGCGACTG GAACCGGCAG AAAAGCCGGT TGCTGAAGAC GGGCTGA
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Protein sequence | MAPRGSQRTV NKIVAENRKA RFNYEIIDTY EAGIMLTGTE VKSLREGKAN IAESYASDEG EEIWLINSHL PEYLQANRFN HEPRRRRKLL LNKREINRLR VAINREGMTL VPLKIYFNEK GRAKLELALA KGKKLHDKRE TEKERDWNRQ KSRLLKTG
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