Gene Avi_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1434 
SymbolsmpB 
ID7386417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1209556 
End bp1210032 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content56% 
IMG OID643650825 
ProductSsrA-binding protein 
Protein accessionYP_002549030 
Protein GI222148073 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0691] tmRNA-binding protein 
TIGRFAM ID[TIGR00086] SsrA-binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.373269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACCCA GAGGCAGCCA GCGCACCGTA AACAAGATCG TCGCGGAAAA CCGCAAGGCG 
CGGTTTAACT ATGAGATCAT CGATACCTAC GAGGCTGGCA TCATGCTGAC CGGCACGGAG
GTCAAGTCTC TGCGTGAAGG CAAGGCCAAT ATTGCCGAAT CCTATGCTTC GGACGAGGGT
GAGGAAATCT GGCTGATCAA TTCGCATCTG CCGGAATATC TTCAGGCCAA CCGTTTCAAC
CATGAACCGC GCCGTCGCCG CAAATTGCTG CTCAACAAGC GCGAGATCAA CCGGCTGCGC
GTTGCCATCA ATCGCGAAGG CATGACGCTG GTGCCGTTGA AAATCTATTT CAACGAAAAA
GGCCGCGCCA AGCTGGAACT GGCCTTGGCC AAGGGCAAGA AATTGCATGA CAAGCGCGAG
ACCGAGAAGG AACGCGACTG GAACCGGCAG AAAAGCCGGT TGCTGAAGAC GGGCTGA
 
Protein sequence
MAPRGSQRTV NKIVAENRKA RFNYEIIDTY EAGIMLTGTE VKSLREGKAN IAESYASDEG 
EEIWLINSHL PEYLQANRFN HEPRRRRKLL LNKREINRLR VAINREGMTL VPLKIYFNEK
GRAKLELALA KGKKLHDKRE TEKERDWNRQ KSRLLKTG