Gene Avi_1416 details

Gene Information

• Locus tag: Avi_1416
• ID: 7389141
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1196008
• End bp: 1196700
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643650812
• Product: glutathione S-transferase
• Protein accession: YP_002549018
• Protein GI: 222148061
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0625] Glutathione S-transferase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.664683
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCGC CTATCGAGCT TTATTACTGG CCCACGCCGA ACGGCTGGAA GATTTCCATT 
CTCTTGGAAG AACTCGGCCT GCCCTATGAG GTGACCTACA TCAATATCGG CAAGGGCGAG 
CAATTCGCGC CGGATTTCCT GAAAATTTCC CCCAATAACC GTATGCCAGC GATCATCGAT 
CCGGACGGTC CGGGCGGAGC GCCGATATCC GTGTTCGAAT CTGGCGCCAT TCTGCAATAT 
CTCGGGCGCA AGACCGGCAA ATTTTACCCG ATGGACGAGC GCGCCCGAGT CGAGGTGGAT 
CAGTGGCTGT TCTGGCAGAT GGGCGGCCTT GGCCCGATGG CCGGACAAGC GCATCATTTC 
CGCCAATATG CGCCGGAAAA GATCGAATAC GGCATCAACC GCTATACCAA TGAAGTCAAT 
CGGCTCTATG GCGTGATGAA CAAGCGGCTG GCGGATCGGG AATTTCTGGC GGGCGATTAT 
TCCATTGCCG ACATGGCCTG CATCGGCTGG GTCGTACCCC ATGCCAATCA GGGACAGGAC 
CTCAACGATT TCCCTCATCT GAAGCGCTGG TTTGAGGCGA TGATGGAACG CCCGGCGGTC 
AAGGCCGGTA TTGCTGTTGG CGCCGAGCGG CGCAGCAATG TCGCCACCGA TGAGGAAGCC 
AAGAAAGTCC TGTTTGGCCA AAAGGCGCGA TAA 

 

Protein sequence

MTAPIELYYW PTPNGWKISI LLEELGLPYE VTYINIGKGE QFAPDFLKIS PNNRMPAIID 
PDGPGGAPIS VFESGAILQY LGRKTGKFYP MDERARVEVD QWLFWQMGGL GPMAGQAHHF 
RQYAPEKIEY GINRYTNEVN RLYGVMNKRL ADREFLAGDY SIADMACIGW VVPHANQGQD 
LNDFPHLKRW FEAMMERPAV KAGIAVGAER RSNVATDEEA KKVLFGQKAR