Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1402 |
Symbol | |
ID | 7389129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1180977 |
End bp | 1182581 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650800 |
Product | ABC transporter nucleotide binding/ATPase protein (oligopeptide) |
Protein accession | YP_002549006 |
Protein GI | 222148049 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.536477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGA CCGAAAACCA GACGGTGCTG ACCGTCAAGG ACCTGAAGGT CACATTCACC ACGCCCGATG GCGAGGTGAA TGCCGTCAAG GGCATTTCCT TCGATGTCAA GAAAGGTGAA ACGCTGGCCA TCGTCGGTGA ATCCGGCTCC GGCAAAAGCC AGACGATGAT GGGCATTATG GGGCTTCTGG CCTCGAATGG ACAGGTGGCA GGCTCGGCTC GCTACGGCGA AACCGAACTG GCAGGTGCCA GTATCTCGAC GCTGAACGAC GTGCGCGGCT CGAAGATCAC CATGATCTTT CAAGAGCCAA TGACCTCACT CGATCCGCTC TACACGGTCG GCAAGCAGAT TTCCGAGCCG TTGATTTTTC ATCGCCGCAT GAGCCGGTCG AAGGCGCGCG CCCGCGTGCT GGAATTGCTC AAGCTGGTCG GCATCCCGGA ACCGGAGCGT CGGATCGACA GCTACCCCCA TGAATTGTCC GGCGGCCAGC GCCAGCGCGT GATGATCGCC ATGGCGCTCG CCAATGAGCC GGACCTGCTG ATTGCCGACG AGCCGACCAC GGCGCTGGAC GTAACGATCC AGGCGCAGAT CCTCGATCTT CTCGCCGATT TGCAAAAGCG CTTCGGCATG GCCATCGTGT TGATCACCCA CGACCTCGGT GTGGTCAAGC ATGTTGCCGA CCGAGTGGCG GTCATGCGGC GCGGCGAAAT TGTCGAACAG GGCAGCCGGG ACGATATTTT CGACCGCCCG CAGGCCGATT ACACCAAGAT GCTGCTGGCC GCCGAACCAT CAGGCTCCAA GGCCGCACCG CCCTCCGATG CGCCGGTCAT TCTCGAAGGC CGCAATGTCG TGGTGGATTT CAACATCAGC TCCGGCATCC TGTTCAAGGG CAATCGAAAA TTCCGGGCCG TCGATCATGT CAATCTGAAG CTTCGCCAGG GCCAAACCAT TGGCATTGTC GGCGAATCCG GTTCGGGCAA ATCCACGCTG GGACGGGCGC TGCTAAAGTT GCTCTCCGCC GATGGCCGGT TCAGCTTCGA GACCACGGAT ATTTCCGGCC TTGACCGCGC CGGGATGCGT CCCTTCCGTC GTCAATTGCA GCTGGTGTTT CAGGATCCCT ACGGCTCGCT CTCGCCCCGC CAGACGGTCG GCGAGATCAT CACCGAAGGG CTTTACGTGC ATGAGCCTGA TCTTAGCAAG GCGGAACGCG ACAAGCGTGC CATTGCCGCC TTGAAGGAAG TCGGCCTCGA TCCCGCCTCG CGCAATCGCT ATCCGCATGA GTTTTCCGGC GGCCAGCGTC AGCGTATCGC CATCGCCCGC TCGATGATCC TCAAGCCGAA AGTGGTAATC CTTGATGAAC CGACCTCGGC CCTGGACCGT TCGGTGCAGC GGCAGGTGAT CGAGTTGCTA CGCGACCTGC AACAGAAACA CGACCTGTCC TACGTGTTCA TCAGCCACGA TCTGTCGGTG ATCAAGGCGA TTTCCGACCA TGTGATCGTG ATGAAGAACG GAAAGATCGT TGAAGAAGGG CCGACGGAAG ACATTTTCGA AAGCCCCGCC GAGGACTATA CCAAGGCCCT GATTGCGGCT GCGTTTACGC ATTGA
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Protein sequence | MDKTENQTVL TVKDLKVTFT TPDGEVNAVK GISFDVKKGE TLAIVGESGS GKSQTMMGIM GLLASNGQVA GSARYGETEL AGASISTLND VRGSKITMIF QEPMTSLDPL YTVGKQISEP LIFHRRMSRS KARARVLELL KLVGIPEPER RIDSYPHELS GGQRQRVMIA MALANEPDLL IADEPTTALD VTIQAQILDL LADLQKRFGM AIVLITHDLG VVKHVADRVA VMRRGEIVEQ GSRDDIFDRP QADYTKMLLA AEPSGSKAAP PSDAPVILEG RNVVVDFNIS SGILFKGNRK FRAVDHVNLK LRQGQTIGIV GESGSGKSTL GRALLKLLSA DGRFSFETTD ISGLDRAGMR PFRRQLQLVF QDPYGSLSPR QTVGEIITEG LYVHEPDLSK AERDKRAIAA LKEVGLDPAS RNRYPHEFSG GQRQRIAIAR SMILKPKVVI LDEPTSALDR SVQRQVIELL RDLQQKHDLS YVFISHDLSV IKAISDHVIV MKNGKIVEEG PTEDIFESPA EDYTKALIAA AFTH
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