Gene Avi_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1392 
Symbol 
ID7389121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1170115 
End bp1171776 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content59% 
IMG OID643650792 
Productelectrotransfer ubiquinone oxidoreductase 
Protein accessionYP_002548998 
Protein GI222148041 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC AAGAGCTGCC CGAGCGCGAG AGCATGGAAT TTGACGTGGT GATTGTTGGG 
GCAGGGCCTG CGGGCCTATC GGCTGCCATT CGCCTCAAGC AGGTCAATCC CGATCTGACG
GTTGTCGTGC TGGAAAAGGG TGCGGAAGTC GGCGCCCATA TCCTCTCCGG GGCTGTGGTC
GATCCGGTTG GCGTCGATAA GCTTCTCCCG GATTGGCGCA AGGAAGCCGA TCATCCGTTC
AAGACCGAAG TCACCGCCGA CCATTTCCTG TTTCTCGGTC CCGCAGGCTC CATTCGCCTG
CCCAACGCCC TGATGCCGCC GCTGATGAAC AATCACGGCA ATTACATCGT CTCGCTCGGC
AATGTCTGTC GGTGGCTGGC GGGCCATGCC GAGGCGCTGG GCGTCGAGAT CTACCCGGGC
TTTGCCGCCA CTGAACTGCT TTATAATCAG GCTGGCGCGG TGATTGGTGT TGCCACCGGT
GATATGGGCA TCGAGAAGAA CGGCGAACCC GGTTCCAGTT ACACGCGCGG CATGGAATTG
TTGGGCAAAT ATGTGCTGAT CGGCGAAGGC GTGCGTGGCT CGCTTGCCAA GCAGTTAATC
GCCAAATTCG ATCTGTCACG CGAGAGCGAT GTGCAGAAAT TCGGCCTCGG CATCAAGGAA
CTGTGGCAGG TCAAGCCTGA GCACCATAAG CCCGGCCTGG TCCAGCACTC ATTCGGCTGG
CCACTGGACA TGAAAACCGG TGGCGGCTCC TTCCTCTATC ATCTCGAGGA TAATCAGGTC
GCGGTCGGCT TTGTCGTGCA TCTGAACTAC AAGAACCCCT ATCTCTATCC CTTCGAGGAG
TTCCAGCGCT TCAAGACCCA TCCGGCGATC CGTGAAACCT TTGAGGGTGC TAAACGGATT
TCCTATGGAG CGCGGGCGAT TACCGAAGGC GGCTATCAGT CGGTGCCGAA ATTGTCCTTC
CCCGGTGGGG CGCTGCTGGG CTGTTCGGCG GGCATGGTCA ACGTGCCGCG CATCAAGGGC
AGCCATAATG CCGTTTTGTC GGGGATGATG GCGGCGGAAA AGATTGCCGA GGCAATTGCG
GCGGGTCGCG CCAATGATGA GCCGGTCGAG ATCGAAAACA GCTGGCGCGG CATTGAAATC
GGCACGGATT TGCGGCGGGT GCGAAACGTC AAGCCGCTGT GGTCGAAACT CGGCACGGTG
CTGGGCGTGG CGCTGGGTGG GCTGGATATG TGGACCAACC AGCTTCTCGG CTTTTCTGTC
TTCGGCACGC TGAAACATGG CAAGACCGAT GCTGAGAGCC TTGAACCTGC TGCAAAGCAT
AAGAAGATCG ACTATCCCAA GCCGGATGGC GTGCTGACCT TCGACCGCCT GTCCTCGGTG
TTTCTGTCCA ACACCAATCA CGAGGAAGAC CAGCCGGTGC ATCTGAAGGT CAAGGACATG
GCGCTGCAAA AGTCCTCCGA GCTTGGCGTC TATGCCGGTC CGTCCAGCCG CTACTGTCCC
GCCGGGGTTT ATGAATGGGT GGAGAAGGAG GGCGAGCCGA GTTTCGTCAT CAACGCCCAG
AACTGCGTCC ACTGCAAGAC CTGCGACATC AAGGACCCGA ACCAGAACAT CACCTGGGTG
CCGCCACAAG GAGGCGAAGG ACCGGTTTAC CCGAACATGT AA
 
Protein sequence
MSEQELPERE SMEFDVVIVG AGPAGLSAAI RLKQVNPDLT VVVLEKGAEV GAHILSGAVV 
DPVGVDKLLP DWRKEADHPF KTEVTADHFL FLGPAGSIRL PNALMPPLMN NHGNYIVSLG
NVCRWLAGHA EALGVEIYPG FAATELLYNQ AGAVIGVATG DMGIEKNGEP GSSYTRGMEL
LGKYVLIGEG VRGSLAKQLI AKFDLSRESD VQKFGLGIKE LWQVKPEHHK PGLVQHSFGW
PLDMKTGGGS FLYHLEDNQV AVGFVVHLNY KNPYLYPFEE FQRFKTHPAI RETFEGAKRI
SYGARAITEG GYQSVPKLSF PGGALLGCSA GMVNVPRIKG SHNAVLSGMM AAEKIAEAIA
AGRANDEPVE IENSWRGIEI GTDLRRVRNV KPLWSKLGTV LGVALGGLDM WTNQLLGFSV
FGTLKHGKTD AESLEPAAKH KKIDYPKPDG VLTFDRLSSV FLSNTNHEED QPVHLKVKDM
ALQKSSELGV YAGPSSRYCP AGVYEWVEKE GEPSFVINAQ NCVHCKTCDI KDPNQNITWV
PPQGGEGPVY PNM