| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1380 |
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| Symbol | |
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| ID | 7389113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1158306 |
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| End bp | 1159538 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650784 |
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| Product | MFS permease |
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| Protein accession | YP_002548990 |
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| Protein GI | 222148033 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.897204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCCA GTCTCGCCTC CATCGGCGCC CTCATGCTCT CAACCCTGCT GATGATGGCT
GGATTCGGGC TGATGAATTA TATGCTGCCA ATCCGGGCGA TTGCCGAGGG GTGGTCGACA
TTCACCATTT CAATCATCGC TACCGGTTAT ACATTTGGCT TTACCACATC CTGCGTCGTC
ACGCCTCGCC TGGTGCAGAA GGTGGGACAT GTCCGGGTTT TTTCCGCCTT AATCACTCTC
CTGACCATGT CTGTCCTACT CTGCGCCATC GTTGTCGACT GGCGGGCCTG GACCTTGTTC
CGAGGCATTG CTGGCTTTGC CATTGCCGGC AGCTACCTGA TCATCGAAAG CTGGCTGAAT
GAGCGCAGCA ACAATGAAAA CCGTGGCGGA TTGTTTTCCA TCTATATGAT TTCCTGCCTG
GTTGGCTCGA TTGGTGGCCA GTATATCGTG CCGCTTGGCG ATCCAAGCCA GGTGACACTG
TTCGTCGTCT GCGGGCTGAT TTTTTCCGCA GCCCTGTTTC CCACCGCTCT CTCCACCGCC
CAATCGCCCG CACCTCTGGC CCAGGCACGG TTCGACCTGA AGAAGCTCTA TATCCGCTCG
CCCATTGCCT TTGTCGGTTC ACTGCTGTCA GGCGCTCTAT CGGGAACCTG GAGCAGTCTC
GGCGCGGTTT ACAGCCAACG GGTCGGTCTT TCGACGGCGG AAGGCGCGAC ATTCCTGGCA
GCCGTGCTGG CCGGAGGCGC CATCGCGCAG ATGCCGCTCG GGCGGCTGTC CGATCGCATG
GACCGCCGCC GCGTTATGGT TGGCGCTGGC TTGTTCGGGG TGTTTTGCTG CGCGGTGATG
ATCGTGCTGG GCGGAATTTC GCCATTGGCA CTCTATATCT GCGGCTTCTT TGTCGGCACC
GTGCTTTATC CGGTCTATTC ACTCAATGTC GCTCATGCCA ATGATATGGC CGACCCCGAT
GAATATGTGA CGATTTCCAG TGCCATCATG ATTCTCTACG GCTTCGGCAC CGTCACCGGT
CCGCTGGTGA CAGGCGCAAT CATGCAGGGC GTCGGTCCCA ACGGACTGCT ATTCAGCCTC
GCCATCAGCT TTCTTCTCTA CGCAGGCTAT GCAGCATGGC GGATGCGACA GCGCAGCGCC
GTCCCTGACC AGCCCGGCAA GACCGAGTTT CAGGCCTCCT CCATCCCGCT CCAGGGCACG
GAAGCCGTCT CCAGCAAGAT CACCGATCTC TAA
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| Protein sequence | MIASLASIGA LMLSTLLMMA GFGLMNYMLP IRAIAEGWST FTISIIATGY TFGFTTSCVV
TPRLVQKVGH VRVFSALITL LTMSVLLCAI VVDWRAWTLF RGIAGFAIAG SYLIIESWLN
ERSNNENRGG LFSIYMISCL VGSIGGQYIV PLGDPSQVTL FVVCGLIFSA ALFPTALSTA
QSPAPLAQAR FDLKKLYIRS PIAFVGSLLS GALSGTWSSL GAVYSQRVGL STAEGATFLA
AVLAGGAIAQ MPLGRLSDRM DRRRVMVGAG LFGVFCCAVM IVLGGISPLA LYICGFFVGT
VLYPVYSLNV AHANDMADPD EYVTISSAIM ILYGFGTVTG PLVTGAIMQG VGPNGLLFSL
AISFLLYAGY AAWRMRQRSA VPDQPGKTEF QASSIPLQGT EAVSSKITDL
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