| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1358 |
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| Symbol | phoP |
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| ID | 7389098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1135659 |
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| End bp | 1136333 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650769 |
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| Product | two component response regulator |
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| Protein accession | YP_002548975 |
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| Protein GI | 222148018 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.333715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCATTC TCGTCGTCGA GGACGATGTC AACCTGAACC GCCAGCTGGT CGAGGCGCTT
CAGGAGGCAG GCTATGTGGT CGACCAGGCT ATGGATGGCG AGGAAGGTCA TTATCTCGGT
GATACCGAGC CCTATGACGC CGTGATCCTC GATATCGGTC TGCCGACCAT GGACGGCATT
ACGGTTCTGG AAAAATGGCG CTCTGCCGGA CGTGCCATGC CGGTGCTGAT CCTGACCGCC
CGCGACCGCT GGAGCGACAA GGTATCCGGT ATCGACGCTG GTGCCGACGA CTATGTCACT
AAGCCTTTCC ACGTCGAAGA GGTGCTGGCG CGCATCCGGG CGCTGATTCG CCGCGCCGCC
GGCCATGCCT CGTCGGAAAT CGCCTGCGGG CCGGTGCGGC TCGACACCAA GAGTTCCAAG
GTCACCGTTT CGGGCAAGGC GCTGAAACTC ACTTCCCATG AATTCCGGCT GCTGTCTTAT
CTCATGCATC ACATGGGGGA GGTCGTGTCG CGCACCGAAC TGGTCGAGCA TATGTATGAC
CAGGATTTCG ACCGCGATTC CAACACGATC GAAGTGTTTG TCGGGCGGCT GCGCAAGAAG
ATCGGGCTGG ACATGATCGA GACCGTGCGC GGTCTAGGCT ACCGGATCAA AGCGCCTGAC
AGCGTCGAGG GCTAG
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| Protein sequence | MRILVVEDDV NLNRQLVEAL QEAGYVVDQA MDGEEGHYLG DTEPYDAVIL DIGLPTMDGI
TVLEKWRSAG RAMPVLILTA RDRWSDKVSG IDAGADDYVT KPFHVEEVLA RIRALIRRAA
GHASSEIACG PVRLDTKSSK VTVSGKALKL TSHEFRLLSY LMHHMGEVVS RTELVEHMYD
QDFDRDSNTI EVFVGRLRKK IGLDMIETVR GLGYRIKAPD SVEG
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