Gene Avi_1337 details

Gene Information

• Locus tag: Avi_1337
• ID: 7389082
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1122178
• End bp: 1122747
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643650753
• Product: phage prohead protease HK97 family
• Protein accession: YP_002548959
• Protein GI: 222148002
• COG category: [R] General function prediction only
• COG ID: [COG3740] Phage head maturation protease
• TIGRFAM ID: [TIGR01543] phage prohead protease, HK97 family

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00130891
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGCTT ATCGCGGGCC AGGAAAGCTG GTGCGCAAAT TTGCCGATCT GACCCTGTCG 
GATCTCAGCG GTGACGGCAC GTTCAGCGGC TATGCCAGCG TGTTCGGCGA GGTGGATCTG 
GGGCGCGACG TGATCGAGCC GGGGGCCTTT CGCACCAGCT TGCAGGGGCG CGGCGCAGGC 
GGCATCCGCA TGCTCTACCA GCACGACCCC AACCAGCCGA TTGGCAGCTG GACGCTGCTC 
AAGGAGGATG CGCGGGGCCT TTATGTCGAG GGACGGCTTT CCCCCGGCGT CAAGCGTGCC 
GAGGAGGTGC GCGCCCTGAT GAAATCAGGC GCGCTGGACG GGCTGTCGAT TGGTTTCCAG 
ACGGTCAAAT CCCGCCAAGA CGCCAAGACC GGCATTCGCC GCATTCTGGA GGCCGATCTC 
TGGGAAATTT CCGTCGTCAC CTTTCCCATG GCGCCTTCGG CCAGGGTTTC CAATGTCAAG 
CATCAGCGGT TTTTCCGCGA CAAGGATACC GAGCTGATCC GGGCGATGCG CCGGGCAGCC 
CGGACGATGG CCAACAGCAA TTTCAAATAA 

 

Protein sequence

MHAYRGPGKL VRKFADLTLS DLSGDGTFSG YASVFGEVDL GRDVIEPGAF RTSLQGRGAG 
GIRMLYQHDP NQPIGSWTLL KEDARGLYVE GRLSPGVKRA EEVRALMKSG ALDGLSIGFQ 
TVKSRQDAKT GIRRILEADL WEISVVTFPM APSARVSNVK HQRFFRDKDT ELIRAMRRAA 
RTMANSNFK