| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1305 |
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| Symbol | |
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| ID | 7387668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1093529 |
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| End bp | 1095328 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650729 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002548935 |
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| Protein GI | 222147978 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.282696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTCAGTA AAGAGGACCG CAAGTCGCGG AAATTTGGCG TGTTGGTATT GAGTAAAATC
GCTGATCGGG CAAAGACCCT TCTCGACGAA GCCGTGACCC TGGTGGTGAC GCGCATCGGC
GCGGAAGCCT CGCCGTCTCG CGCCGAAGTT GCGGCGGCAC GTTGCGTGGT CCTGGCCTGC
TTGCCCGCTC TGGTCCTCGT GCCGCTCACC CTGTCCTTCT TTCAAGGTGT CGCCGTGGCC
CTGCCGCTTG GCGTTGCCAT TGTTGCCGGC CTGTTTCTGA TCGCCGTGGT CGCCGCCCTG
TGGCTGGCGC GCCTGTCTTC TCGCCAGCCG GCTATCCGCC ATTCCCTCGA CACGAGTGCT
TCCATCGATC TGTCGCTGTT TCCCGGCATG GTTTTCACCC TGGATGCCCA GGCGCGGGTA
GAAACCGTCG GCGGGCGCGA TGCCCGCGAC TTCCTGCCTT TCCTGCGCAA TCCGCTCGGC
CGTCCCTTCA TCGATCAGGT GCATGTTACC GACCGTATCG CCTTTGTGCG TGCCTTTGAC
GCCCTGCGCC AGGGCGAGGA TATCGGTCGT GTGAAGCTGC GGCTTGCCCG CCCCACCAAT
GCCCATTCTG AAGGCTCTAA CGGCGAAAAC CTGCATGGCG AAATCACGAG CGACGAGGCT
GCCGATGGCA CGCTGATGGC GGTTGGGCTT GACATGGCCG TGCGCCGCGA CGAGCGCGGT
GGCATTGCCG GGATTTTCGT GCAGATGCTG GATTGCCGCG AGCAACAGCA GATGGCGCAG
CGGCTGGTCA AGCTCGATGC CGATTTGCAG ACGGCCAATG AAGCCAAATC TCGCTTTCTC
GCTGCCGTCA GCCATGAATT GCGCACGCCG CTGAATGCCA TACTCGGTTT TTCCGATATT
CTGATGGGCG ATTATTTCGG CCGGATGGAA GATGAACGTC ACCGGGAATA TGTGCGGTTG
ATCCGCCAAT CCGGCGGCCA TCTTCTGTCG GTCGTCAATA CCATGCTCGA TATGTGCCGC
ATCGAGGCCG GGCGCTACGA ATTGCTGGTG GAGCCGTTCT CGCTTTCGCA GGCCATTCAC
GATTGTGAAA ACATGCTGGC CTTGCAGGCG CAGGAAAAAG GCGTGAAGCT CACCAGCCGC
ATTGGCCGCG ATGTGAGCGA GCTGACCGCC GATCCGCGCG CCGTGCGTCA GATCCTGATC
AATCTTGTTG GTAACGCCAT TAAATTCACC GAGCCGGGTG GTGTTGTCAC CGTGGATGCG
GCACGTTTCG GCAAGGATCT GGTGATCTCT GTCAGCGATA CGGGTATCGG TATCGCCCAG
GATCGCATCC TTCTGCTTGG CCAGCCTTTC GTTCAGGTCG ACAGTGATTA TAACAGGAAA
TTCGACGGCG TCGGCCTGGG CCTGTCGCTG GTCAAGGGGC TGGTTGCCCT GCATGGTGGC
ACATTCCTGT TGACGAGCCG TGAGGGGGAG GGGACGGTGG TTTCCATCAC CCTGCCAATC
GACGGATCGG GCATTGCCCG GGTTCAATCC ACAGGCGAAA GCCGTCAGAT CGAATTTCCG
CCACGCTTGC CCGTCAGTGA AAGGCAGCCT GGTCGCGAGA GGCTCGATGG CTCAAAAAGC
GAGATCTTGG GGAGCGACAG GGCGGGGCTT GCCCAATCGT CGCGGCAGCA CCAGATGGAT
GAGGTCTGTT TTGAAGAGGG TGCGGGACAA ACGCATGAGC AGCAGGGTAG CGGGCAGCCG
GGCCAAAGGA TGGGCCAGCA AAAGGATGTG AATGACGACG CGAAAGCGAA AATCGCCTGA
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| Protein sequence | MVSKEDRKSR KFGVLVLSKI ADRAKTLLDE AVTLVVTRIG AEASPSRAEV AAARCVVLAC
LPALVLVPLT LSFFQGVAVA LPLGVAIVAG LFLIAVVAAL WLARLSSRQP AIRHSLDTSA
SIDLSLFPGM VFTLDAQARV ETVGGRDARD FLPFLRNPLG RPFIDQVHVT DRIAFVRAFD
ALRQGEDIGR VKLRLARPTN AHSEGSNGEN LHGEITSDEA ADGTLMAVGL DMAVRRDERG
GIAGIFVQML DCREQQQMAQ RLVKLDADLQ TANEAKSRFL AAVSHELRTP LNAILGFSDI
LMGDYFGRME DERHREYVRL IRQSGGHLLS VVNTMLDMCR IEAGRYELLV EPFSLSQAIH
DCENMLALQA QEKGVKLTSR IGRDVSELTA DPRAVRQILI NLVGNAIKFT EPGGVVTVDA
ARFGKDLVIS VSDTGIGIAQ DRILLLGQPF VQVDSDYNRK FDGVGLGLSL VKGLVALHGG
TFLLTSREGE GTVVSITLPI DGSGIARVQS TGESRQIEFP PRLPVSERQP GRERLDGSKS
EILGSDRAGL AQSSRQHQMD EVCFEEGAGQ THEQQGSGQP GQRMGQQKDV NDDAKAKIA
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