Gene Avi_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1240 
SymbolacpD 
ID7387624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1048194 
End bp1048814 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content61% 
IMG OID643650685 
Productacyl-carrier-protein phosphodiesterase 
Protein accessionYP_002548891 
Protein GI222147934 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGA AACTTCTGCA TCTCGATTCC AGCGTGCTTG GCCCCTATTC CGTCAGCCGC 
GACCTGTCGG CGTCGATTGT GAAGACACTC AGCGAAAAGA CCGCTGGCCT CGACGTCACC 
TACCGCGATC TGGCCGCCAA TCCGCTTCCG CATCTCTCCG GCCTGACGCT GGCGGCTGCC 
ATGGGCAATT ACGATGCCAG CAATGACGAA GCCACCAAGG CCGATCTGGC GCTGGGCGGC 
GAAGTGCTGG AACAGTTCCT CACCTCCGAC GTGGTCGTTA TCGGCGTCGG CTTCTACAAT 
TTCGGCATTC CGAGCCAGCT CAAGGCCTGG ATCGATCGCA TCAGCGTTGC CGGCAAGACC 
TTCAAATACG GCGCTACCGG TCCTGAAGGC CTGTGCGGCG GCAAGCGGGT GATCGTTGCC 
ATCTCGCGCG GCGGCATCTA CAGCCAGGGC CCTGCGGCTC CGCTTGAACA TGCCGAAACC 
TATCTGAAGG GCGTCTTCAC CTTCCTCGGC ATCACCGATC TGGAATTCGT TGTCGCCGAA 
GGCGTCAACA TGGGCGAAGA AGCCAAGGCC GCTGCCGTCA AGGGCGCCAA GGATTCGATC 
GCGACCCTGA AGGCCGCTTG A
 
Protein sequence
MTMKLLHLDS SVLGPYSVSR DLSASIVKTL SEKTAGLDVT YRDLAANPLP HLSGLTLAAA 
MGNYDASNDE ATKADLALGG EVLEQFLTSD VVVIGVGFYN FGIPSQLKAW IDRISVAGKT 
FKYGATGPEG LCGGKRVIVA ISRGGIYSQG PAAPLEHAET YLKGVFTFLG ITDLEFVVAE 
GVNMGEEAKA AAVKGAKDSI ATLKAA