Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1236 |
Symbol | |
ID | 7387621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1045054 |
End bp | 1045527 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643650682 |
Product | cytochrome C-556 |
Protein accession | YP_002548888 |
Protein GI | 222147931 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGA TATCAGGGCT TGGCATGAGG AAGCTTGCAA CAATGGCCGC CATTGGCCTC TGTCTTGGCG CCGGCCTCAG CAGCGCGGTC AGCGCCGCTG ATGAGCCGCA GGTGGTGCGC GCTGGAATGA TGAAGAAAGT CGGCGGTGCT ATGGGCCAGC TGGCCGCTAT CGCCAAGGGC GAAAAGCCCT ATGACGCAGC CGTGGTCAAG GCTTCGCTGA CCACGATGGA AGAGGTTGCC AAGGCCTTCC CGGAACAGTT CCCCAAGGGC TCCGAGACCG GCCTCAACAC GGAAGCCAGC CCGAAGATCT GGGAAGACCC GGCCACCTTC AAGACCAAGG CCAAGGCGCT TGAAACCGCC GCTGCAACGC AGCTCGCCAC CCTGCCCGCC GATCAGGCTG GCGTTGGCGC GGCAATGAAG AGCATTGGCG GCACCTGTGG CGATTGCCAC CAGACGTTCA GGCTGAAGAA ATAA
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Protein sequence | MTMISGLGMR KLATMAAIGL CLGAGLSSAV SAADEPQVVR AGMMKKVGGA MGQLAAIAKG EKPYDAAVVK ASLTTMEEVA KAFPEQFPKG SETGLNTEAS PKIWEDPATF KTKAKALETA AATQLATLPA DQAGVGAAMK SIGGTCGDCH QTFRLKK
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