Gene Avi_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1236 
Symbol 
ID7387621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1045054 
End bp1045527 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content62% 
IMG OID643650682 
Productcytochrome C-556 
Protein accessionYP_002548888 
Protein GI222147931 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGA TATCAGGGCT TGGCATGAGG AAGCTTGCAA CAATGGCCGC CATTGGCCTC 
TGTCTTGGCG CCGGCCTCAG CAGCGCGGTC AGCGCCGCTG ATGAGCCGCA GGTGGTGCGC
GCTGGAATGA TGAAGAAAGT CGGCGGTGCT ATGGGCCAGC TGGCCGCTAT CGCCAAGGGC
GAAAAGCCCT ATGACGCAGC CGTGGTCAAG GCTTCGCTGA CCACGATGGA AGAGGTTGCC
AAGGCCTTCC CGGAACAGTT CCCCAAGGGC TCCGAGACCG GCCTCAACAC GGAAGCCAGC
CCGAAGATCT GGGAAGACCC GGCCACCTTC AAGACCAAGG CCAAGGCGCT TGAAACCGCC
GCTGCAACGC AGCTCGCCAC CCTGCCCGCC GATCAGGCTG GCGTTGGCGC GGCAATGAAG
AGCATTGGCG GCACCTGTGG CGATTGCCAC CAGACGTTCA GGCTGAAGAA ATAA
 
Protein sequence
MTMISGLGMR KLATMAAIGL CLGAGLSSAV SAADEPQVVR AGMMKKVGGA MGQLAAIAKG 
EKPYDAAVVK ASLTTMEEVA KAFPEQFPKG SETGLNTEAS PKIWEDPATF KTKAKALETA
AATQLATLPA DQAGVGAAMK SIGGTCGDCH QTFRLKK