| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1220 |
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| Symbol | |
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| ID | 7387610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1033933 |
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| End bp | 1035084 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650671 |
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| Product | ABC transporter substrate binding protein (iron) |
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| Protein accession | YP_002548877 |
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| Protein GI | 222147920 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0484482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTCA GAATGATCAT GCGGGCGCTC GTCGCCGTTT TGCCGTTTAT GGCCGCACCT
GCTCTCGCCG CCGAGATTAC CGATGTCGCT GGCCGCACGG TGACGCTCGA CCTGCCTGCA
AAGCGGGTTC TGGTCGGCGA GGCCAGGCAG ATCCACACCA TCGCGGCGCT GGCCGGGGAC
AAGACCTTCG ACACTATTGT CGGCTGGCGT GATGACATGG TGAAAAAGGA CCCAGACAGC
TACGCCGCCT ATGTCGAGCG CTTCCCTGAG ATCGCCAAGC TGCCGCAATT CGGCTATCTG
CCGCAGGGCG GTTTCAGCCT GGAAGCAGCG ATTGCCCTGC ATCCCGATGT GATGACGCTT
AATCTGGAAG TGTTACAGGC GGCGCGTGAA AGCGGGCTGG AGGAAAAAGC GGCAGCGGCG
GGCATTCAGG TCGTCTATGT CGATTTCCGC CTCGATCCTG ACAAGAATAC CGAGAAATCC
ATTGAAATCC TCGGCCAGAT TTTTGGCGCA GAAGACAAGG CGAAAGAGCT GATCGCCTAT
CGCCGCCAGC AGATTGCAAT TGTCACCGAC CGGCTGGCCG CTGTGAAGGA CCTGAAACGA
CCCAACGTCT TCATGGAACG CGCGCCGGGC AATGATGCGG AAGGCGGCTG CTGCCGCACC
TTCGGCCCGG CCAATTTCGG CCAGATGATC GATATCGCCG GTGGGCATAA TATCGCCTCC
GACATCATCT CCACCACCTT TGGCGAAATC AGCATCGAAC AGCTGATCGC CTCCGATCCG
GCCCAGATCA TCGTCACCGG CTCCAACTGG CTGGCGGAAT CCAAGACCAA CCGTTTCGTG
CATGTCGGGC GGGGTGCCGA TCCCGAAAAG GCCCGCGCCA AGCTGCAAAC CCTGATCGAG
CGCACCGGCT TTGACGGACT TGCCGCCGTG CGCAATCGCC AGGTTCATGC CGCGTGGCAT
CAGTTCTACG GCGTACCCTA TGAATTTGTT CCTATCCAGC AATTTGCCAA ATGGTTCCAC
CCGGAGCTGT TCGCCGATCT TGACCCTGAC CGGACCTTCC GGGAATTTCA CCAGAAATTC
CTGCCAGTCG CCTATAAGCC GGGCTATTTC GTCTCAATGA ACCCGTCGGA CGACGAAAAA
GGATCAAACT GA
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| Protein sequence | MTFRMIMRAL VAVLPFMAAP ALAAEITDVA GRTVTLDLPA KRVLVGEARQ IHTIAALAGD
KTFDTIVGWR DDMVKKDPDS YAAYVERFPE IAKLPQFGYL PQGGFSLEAA IALHPDVMTL
NLEVLQAARE SGLEEKAAAA GIQVVYVDFR LDPDKNTEKS IEILGQIFGA EDKAKELIAY
RRQQIAIVTD RLAAVKDLKR PNVFMERAPG NDAEGGCCRT FGPANFGQMI DIAGGHNIAS
DIISTTFGEI SIEQLIASDP AQIIVTGSNW LAESKTNRFV HVGRGADPEK ARAKLQTLIE
RTGFDGLAAV RNRQVHAAWH QFYGVPYEFV PIQQFAKWFH PELFADLDPD RTFREFHQKF
LPVAYKPGYF VSMNPSDDEK GSN
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