| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1192 |
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| Symbol | setA |
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| ID | 7386243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1006396 |
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| End bp | 1007733 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650649 |
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| Product | MFS permease |
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| Protein accession | YP_002548855 |
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| Protein GI | 222147898 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.879235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGATCGT GTGTCAGTCA TTGGCCCGAA GCGGACGAAC CAACCGTCCA TTTCTTCATA
TCACAACTAG CCTGTTATAC GGCTGTCATA GTTCCTGCCT ATTGGCCTGA ATTTGCACGT
TGCGGAAATA TCCACGACAG TATCTCGAAA GGCATTTCTA TGAGTGCGAC GATGAGCAGC
CGTTCGCTCT CGCTCTATCC CTTCTTGCTT GTGTTGTTTA TAGGCACGAC CTGCAGCTCC
ATGATCGGGC CGTTCATGGC TTACTACATT GTGGAGGGTT TGGGGCGCGC GCCGTGGACA
ATCAGTCTCT ATGCGGCGGG CGTTACCGTG CTCGGCATAA TCTGCACCCG CACCTTTGGT
CGCTGGCTGG ATGCGGGAAT TGCTCCTTTT CCACTGATCG GTGTAGCACT GGCGGGTTAT
CTTCTTGCCA CGAGTGCCTT GTCAATTTCA CCGTCTTTCT GGATCGTTTT GACATTCGGC
GTGCTCGGAT TTGGTCTGAG CAGCAGTGCG GTATCCACCA TGTTCAGCCT CGGGGCGGTC
GTAGCAGAAC GCGGCAAGAT TACGCGTGGC CGGTCCAATG CATTCCTGCG CGCCACGACA
TCAACCGCCT GGATGATAGG GCCGGCGGTC GCCTTCCTGT TCGCAGAGCG CTTCGGCGAA
GCTGCCGTCT TCAAGCTCGC TTTTGCCCTG GCATGCTGCT GGGCGTTGAT GTGGTGGATA
ATTATCCCGC GCGATATGAC ACTTCGTCCC AAGTCAGGAT CAGTACACGC ACATTCTTCC
AACAAGGACG TCGGCCTGTG GTTGGCGGCC GCGTTCGTGT TCTGCCTGTC CTCAGCGCAT
TCTCTGACAT TTAGCGCACT GCCATTGTTC TACGTGCGGG AAGTCGGGCT ACCGGGTTAT
GCGCCAGGCA CGGCCTTCAG CATGAAGACC TTCGTGGAGG TCCTCGCTAT CTTCACCACG
CCAATGATCA TCTCCCGCTT TGGCCTGAAA GGGCCACTTG TCGCAGTGGC GCTGCTGGCT
ACCGTAACGA TCCTGCTGCT CTCCTATGTG CAGACCTATC CACAGATGTT GGCAGGCGCG
GCCTTGGAGG GCCTGTATTA CGGCCTCTAT GCCAGCATCG GCATCAGTTT CGTGCAATCT
TTCTCCGGTG ATCGCCCGGC GCAGGCCACC GCGCTTTACT GGAATGTTCT GAGTGTCAGT
GGCATTCTTG CGGGCCCCGC GACCGGCCTC ATAGCGCAAG CCTACGATTT CCGAGCAGTT
ATCCAGGTGG CCTCGGTTGT CGCTGCTTTC GCCGCTATTC TCCTTTTCAC GTCAATGTTT
CGTAAGCACT CGCGATAA
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| Protein sequence | MGSCVSHWPE ADEPTVHFFI SQLACYTAVI VPAYWPEFAR CGNIHDSISK GISMSATMSS
RSLSLYPFLL VLFIGTTCSS MIGPFMAYYI VEGLGRAPWT ISLYAAGVTV LGIICTRTFG
RWLDAGIAPF PLIGVALAGY LLATSALSIS PSFWIVLTFG VLGFGLSSSA VSTMFSLGAV
VAERGKITRG RSNAFLRATT STAWMIGPAV AFLFAERFGE AAVFKLAFAL ACCWALMWWI
IIPRDMTLRP KSGSVHAHSS NKDVGLWLAA AFVFCLSSAH SLTFSALPLF YVREVGLPGY
APGTAFSMKT FVEVLAIFTT PMIISRFGLK GPLVAVALLA TVTILLLSYV QTYPQMLAGA
ALEGLYYGLY ASIGISFVQS FSGDRPAQAT ALYWNVLSVS GILAGPATGL IAQAYDFRAV
IQVASVVAAF AAILLFTSMF RKHSR
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