Gene Avi_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1156 
Symbolqor 
ID7386216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp975478 
End bp976647 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content60% 
IMG OID643650622 
Productquinone oxidoreductase 
Protein accessionYP_002548828 
Protein GI222147871 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGGCA AGGGGCTTTT TGTGCATTCA AATGGTCCTG AACTATCGGG ATTCTGGGTC 
ATTCGTTCGG TATTAGAAGG ACTTATGCCG CCCCGCGTCG ATCCGTCTTC TTTTCTTTTC
GTCTCTCGGT CTCTAGATAA GGTCGAGGTA CACTTAGTCC AGAGGCAAAA GATGACGCTT
CCCACGCACA TGCGCTATGT CGATACCCCA TCCTTCGGCG GGCCTGAGGT CATGACAATT
GCCCATGGTC CGCTGCCAGC TCCAGCAGCC GGTGAAATTC TGGTGAAGGT CGAAGCGGCA
GGCGTCAATC GGCCGGATGT GGCGCAGCGC CAGGGCAGTT ATCCGCCGCC GAAGGGCGCA
AGCCCTGTTC TCGGCCTGGA AGTGGCTGGC ACGGTGGTGG CGCTGGGCGA AGGGGTGAGC
GACTTTGCCA TTGGCGACAA GGTCTGCGGG CTGGCCAATG GCGGCGGTTA TGCCGAGTTC
TGCATTCTTC CGGAAGGCCA AAGCCTGCCC TGGCCCAGGG GATTCGATGC GGTGAAAGCG
GCGGCGGTAC CGGAAACCTT CTTCACCGTC TGGGCCAACC TGTTCCAGAT GGCGGGGCTG
ACCGAGGGCG AAACCGTGCT GATCCACGGT GGCTCCTCGG GTATTGGCAC CACGGCCATC
CAGCTTGCCC GTGCTTTCGG TGCCGACGTG CTGACCACGG TTGGTTCGGC TGAAAAGGCC
GAGGCCTGCC TGAAGCTCGG CGCCCGCCGG GCCATCAATT ACCGGAGTGA GGATTTCGCC
GAGGTGGTGA AGGCCGAGAC GGATGGTAAG GGGGTCGATA TCATCCTCGA CATGATCGGC
GCGTCCTATT TTGAAAAGAA TATTGCATCA CTGGCCAAGG ACGGCTGCCT GTCGATCATT
GCTTTTCTCG GCGGTGCCGT GGCCGAAAAG GTCAATCTCG GCCCGATCAT GGTCAAGCGC
CTGACGGTGA CAGGATCAAC GATGCGCCCG CGCACCGCGG AAGAAAAACG CGCCATCCGT
GATGACCTTT TGGCCAGCGC CTGGCCGCTT CTGGAGCAGG GCACCGTCGC GCCAGTCATT
CATACCGTTC TGCCGTTCGA CAAGGTGGCG GATGCGCATC GGCTGATGGA AGACAGCACG
CATATCGGCA AGATTGTGCT GACGCTTTGA
 
Protein sequence
MRGKGLFVHS NGPELSGFWV IRSVLEGLMP PRVDPSSFLF VSRSLDKVEV HLVQRQKMTL 
PTHMRYVDTP SFGGPEVMTI AHGPLPAPAA GEILVKVEAA GVNRPDVAQR QGSYPPPKGA
SPVLGLEVAG TVVALGEGVS DFAIGDKVCG LANGGGYAEF CILPEGQSLP WPRGFDAVKA
AAVPETFFTV WANLFQMAGL TEGETVLIHG GSSGIGTTAI QLARAFGADV LTTVGSAEKA
EACLKLGARR AINYRSEDFA EVVKAETDGK GVDIILDMIG ASYFEKNIAS LAKDGCLSII
AFLGGAVAEK VNLGPIMVKR LTVTGSTMRP RTAEEKRAIR DDLLASAWPL LEQGTVAPVI
HTVLPFDKVA DAHRLMEDST HIGKIVLTL