| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1150 |
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| Symbol | betC |
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| ID | 7386213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 970199 |
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| End bp | 971689 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650619 |
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| Product | choline sulfatase |
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| Protein accession | YP_002548825 |
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| Protein GI | 222147868 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3119] Arylsulfatase A and related enzymes |
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| TIGRFAM ID | [TIGR03417] choline-sulfatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGATC AGCTCAACGG CACGCTGTTT CCCGATGGCC CGGCAGACTG GGTGCATGCG
CCGCATTTGA AAGCGCTGGC AGCCCGTTCC GCCCGCTTTC AAAACAACTA CACATCTTCG
CCGCTCTGTG CCCCGGCCCG CGCCTCTTTC ATGGCCGGTC AACTTCCCAG CCGCACGCAG
GTCTATGACA ATGCGGCGGA ATATGTGTCG TCCATTCCCA CCTATGCGCA TCATCTACGC
CGCGCAGGCT ATTACACGGC GCTTTCGGGC AAGATGCATT TCGTGGGGCC GGATCAATTG
CACGGCTTTG AAGAACGGCT GACCACCGAC ATATACCCCG CCGATTTCGG CTGGACGCCG
GATTATCGCA AACCCGGAGA GCGGATTGAC TGGTGGTATC ACAATCTCGG CTCGGTGACC
GGGGCTGGCG TGGCCGAAAT TACCAACCAG ATGGAATATG ATGATGAAGT GGCCTTTCTG
GCCAATCAGA AGCTCTATCA TCTGAGCCGC GAAAACGATG ATGCGGCTCG TCGCCCGTGG
TGCCTGACGG TGTCCTTCAC CCACCCGCAT GACCCTTACG TGGCCCGCAA ACAATACTGG
GATCTGTATG AGGACAGCAA TCATCTTCTG CCAGACGTGG GTGCGCTGGC GGATCAAGAC
CCGCATTCCA AACGGCTGAT CCATGCTTGT GATTATGACA ATTTCAATGT GACCGAAGAA
GACATCCGCC GCTCGCGCCG CGCCTATTTT GCCAATATTT CCTATATTGA TGACAAGGTG
GGCGAGTTGA TCGACACGCT GACCCGCACA AGAATGCTGG ACAACACCAC CATCCTGTTC
TGCTCCGACC ACGGCGATAT GCTGGGCGAG CGTGGTCTGT GGTTCAAGAT GAATTTCTTT
GAAGGCTCTG CCCGTGTGCC GCTGATGGTG GCTGGCCCCG GCATTGCCCC CGGTCTGCAT
CTGGCCCCAA CCTCCAATCT GGATGTGACG CCAACGCTGT GTGATCTGGC CGGAATTTCC
ATGGATGAGA TCATGCCCTG GACCGATGGC ATGAGCCTCA AGGGCATGAT CGGTGGCGAG
GCCCGCGCAG CACCTGTGCT GATGGAATAT GCCGCCGAAG GCTCCTATGC GCCGATGGTG
TGTATCCGTG AAGGCCAGTG GAAATATGTG CATTGTGCGC TCGATCCCGA CCAATTGTTT
GACCTTGAAA ACGATCCGCA AGAGCTGACC AATCTGGCCG CTGATCCGGC TTATGCCGAT
GTTCTGGCCG ATTTCACCGC CAAGCGCGAG GCCCGCTGGG ACATGGCCCG CTTTGATGCG
GCGGTGCGCG AAAGCCAAGC CCGCCGCTGG GTGGTCTATG AGGCGCTTCG CAACGGCTCC
TATTACCCAT GGGACCACCA ACCGCTGCAA AAGGCATCGG AGCGCTACAT GCGCAACCAT
ATGGACCTGA ATGTGCTGGA AGAAAGCAAA CGCTATCCGA GGGGAGAGTG A
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| Protein sequence | MVDQLNGTLF PDGPADWVHA PHLKALAARS ARFQNNYTSS PLCAPARASF MAGQLPSRTQ
VYDNAAEYVS SIPTYAHHLR RAGYYTALSG KMHFVGPDQL HGFEERLTTD IYPADFGWTP
DYRKPGERID WWYHNLGSVT GAGVAEITNQ MEYDDEVAFL ANQKLYHLSR ENDDAARRPW
CLTVSFTHPH DPYVARKQYW DLYEDSNHLL PDVGALADQD PHSKRLIHAC DYDNFNVTEE
DIRRSRRAYF ANISYIDDKV GELIDTLTRT RMLDNTTILF CSDHGDMLGE RGLWFKMNFF
EGSARVPLMV AGPGIAPGLH LAPTSNLDVT PTLCDLAGIS MDEIMPWTDG MSLKGMIGGE
ARAAPVLMEY AAEGSYAPMV CIREGQWKYV HCALDPDQLF DLENDPQELT NLAADPAYAD
VLADFTAKRE ARWDMARFDA AVRESQARRW VVYEALRNGS YYPWDHQPLQ KASERYMRNH
MDLNVLEESK RYPRGE
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