| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1075 |
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| Symbol | thrC |
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| ID | 7387156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 908511 |
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| End bp | 909818 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650564 |
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| Product | threonine synthase |
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| Protein accession | YP_002548772 |
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| Protein GI | 222147815 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0498] Threonine synthase |
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| TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.515489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGCCCCGCG AATGGCCGAA AATGCGCAAG CGCGACATTC GGGCGCTGCG CGGCAAGACC
TATCAGGAGG TCGCGTTTGC GGTGCTGAAA CCCTTCGTGG ACGGCGAAAT CAAGGATGAT
GCCCTTCAGG CGATGATCCA TGACGCCTAT GCCACCTTCC GCCATCCTGC TGTCGCGCCT
TTAGTGCAGA CCGGGCCGAA TTCCTATATT CTCGAACTGT TCCACGGCAC GACGCTGGCC
TTCAAGGATG TTGCCATGCA ATTGCTTGGC CGGCTGATGG ATCACGTTCT GCGCGAGCGC
GGACAGCGCG CCACCATTGT CGGCGCCACC TCGGGCGATA CAGGCGGGGC GGCCATCGAT
GCCTTTGCCG GTCTTGATAA TATCGACATG TTCATTCTGT TTCCCAAGGG CAAGGTCTCA
CCCGTGCAGC AGCGGCAGAT GACCACATCC AAGGCCGGGA ATGTCCGGGC GGTGGCCATC
GAGGGCAATT TCGACGATTG CCAGGATCTG GTCAAAGCCA TGTTCAACCA TGTCGCTTTT
CGCGACAAAG TACAGCTATC CGGCGTCAAT TCGATCAACT GGGCGCGAAT CATGGCCCAG
GTGGTCTATT ACTTTACCGC TGCCCTTTCG CTGGGGGGAC CGGACCGCAA AATTTCCTTC
ACCGTGCCGA CCGGCAATTT CGGCGATATT TTCGCGGGCT ATGTGGCGCG CGAAATGGGC
CTGCCCATCG ATAAGCTGGT GATAGCCACC AATGATAACG ACATTCTGGC CCGCACGCTG
AAAACCGGAC GCTACGAGAT GCGCGGTGTG ATGGCCACCA CCTCACCATC GATGGATATC
CAGATCTCCT CGAATTTCGA GCGCCTGCTG TTTGAAGCCA GCGGCCGCAA TGCCGGTGAG
ATCCGTTCGC AGATGGCGTC CCTCAAGCAA TCCGGCGCTT TCGAGATCAA GCCGGATGCG
CTCAAAACCA TCCGCAAACT CTTCCGGGCC GGGCGCGCCA CCCAACAGGA CGTGGCCAAA
ACCATCGCCA CCACTTTGGC TGAAACCGGC TATCTGCTTG ATCCCCATAC GGCTTGCGGC
GTGGTGGTCG CATCGAAATT CGAAAAGCCG CAAAGCCCGA TGGTGACGCT GGCCACAGCT
CATCCCGCCA AATTTCCGGC GGCGGTAAAA TCGGCATCGG GTATTGACCC CGCGCTTCCG
ACGTGGCTTG CTGATCTCAT GGATAGGGAG GAGCGTTTCG ACGTCCTTGC TGGCGAGCTC
GACGTAGTGG AGGCATTCAT CTCCGCTCAC TCGCGCGCCG GTGCTTAA
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| Protein sequence | MPREWPKMRK RDIRALRGKT YQEVAFAVLK PFVDGEIKDD ALQAMIHDAY ATFRHPAVAP
LVQTGPNSYI LELFHGTTLA FKDVAMQLLG RLMDHVLRER GQRATIVGAT SGDTGGAAID
AFAGLDNIDM FILFPKGKVS PVQQRQMTTS KAGNVRAVAI EGNFDDCQDL VKAMFNHVAF
RDKVQLSGVN SINWARIMAQ VVYYFTAALS LGGPDRKISF TVPTGNFGDI FAGYVAREMG
LPIDKLVIAT NDNDILARTL KTGRYEMRGV MATTSPSMDI QISSNFERLL FEASGRNAGE
IRSQMASLKQ SGAFEIKPDA LKTIRKLFRA GRATQQDVAK TIATTLAETG YLLDPHTACG
VVVASKFEKP QSPMVTLATA HPAKFPAAVK SASGIDPALP TWLADLMDRE ERFDVLAGEL
DVVEAFISAH SRAGA
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