| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1053 |
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| Symbol | |
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| ID | 7387137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 889159 |
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| End bp | 890046 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643650545 |
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| Product | beta-lactamase class D |
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| Protein accession | YP_002548753 |
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| Protein GI | 222147796 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2602] Beta-lactamase class D |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.110026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCGA TATTTTCCGA TTGCCATGGT AATCCCGCGA CAATAGCGGA CTTTCGTCGC
AATCGAGAAG AGGAACAGGC TGTGAAATTA GGGCAAATCG CGCTGACACT GATCGCAGCC
AGCTTTTTAG CGTCCACGGC GCAGGCTGGA ACGATTTGCA CGGTCATTGC CGATAGCAAA
ACCGGGAAGA CCTTGGTCCA GGACGGCAAT TGTGCGGAGC GTGTCACGCC CGCTTCCACC
TTCAAGGTCG CCCTCAGCGT GATAGGCTAT GATGCCACTT ACCTGAAGGA CGAGCATAAT
CCGACCCTGC CGTTTAAACA GGGTTATGTG GATTGGGGCG GCGACAATTG GAAACAGCCG
ACCGATCCGG TGCGCTGGAT GAAATACTCC GTCGTCTGGT ATTCCCAGCA GATCACCAGG
ACGCTTGGGC AAGACAAGCT TCGTGATTAT GCGACGAAAT TTGCCTATGG CAATGCCGAT
TTTTCCGGCG ATCCTGGCAA AAACAATGGT CTGGAGCGGG CATGGATTGC CTCCTCCTTG
AAGATTTCGC CGCTGGAACA GGTCGCCTTC CTAAGAAAGC TGGTCCAGCA TCAGCTGCCC
GTTCGCCCCG AAGCCATGGA CAAGACACTG GCCATCGTTG AGCAACGCCA GATCGCCGAT
GGCTGGACCG TGCACGGTAA AACCGGCGCG GCCTTCCCTC GTCTTTCGGA CACCGCGTTC
GATTATAGCC GTGGATGGGG CTGGTATGTC GGCTGGGCCA GCAAAGGCAA ACAGACCTAT
GTGTTTGCCC GTCTCATTCA GGATGAGAAA AAAGACCAGA TCACCCCTGG GGGTCGGGCG
CGCGACGCTT TGCTGGAAGA ACTGCCAGAG TTGCTGGCCA GCAAGTGA
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| Protein sequence | MLPIFSDCHG NPATIADFRR NREEEQAVKL GQIALTLIAA SFLASTAQAG TICTVIADSK
TGKTLVQDGN CAERVTPAST FKVALSVIGY DATYLKDEHN PTLPFKQGYV DWGGDNWKQP
TDPVRWMKYS VVWYSQQITR TLGQDKLRDY ATKFAYGNAD FSGDPGKNNG LERAWIASSL
KISPLEQVAF LRKLVQHQLP VRPEAMDKTL AIVEQRQIAD GWTVHGKTGA AFPRLSDTAF
DYSRGWGWYV GWASKGKQTY VFARLIQDEK KDQITPGGRA RDALLEELPE LLASK
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