Gene Avi_1051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1051 
Symbol 
ID7387135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp887723 
End bp888094 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content55% 
IMG OID643650543 
Producthypothetical protein 
Protein accessionYP_002548751 
Protein GI222147794 
COG category[S] Function unknown 
COG ID[COG3759] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.555272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATAT TCTTAATTGC GACAGTTTTG GTCGTTCTTG TCATGCTGGA ACATATCTAC 
ATCATGGTGC TGGAAATGTT TCTCTGGACG ACACCGCGCG CCCGGAAAAT CTTCCGTAAA
AGCCTGCAGG GCGCTGAAAC CACTCGGGTG ATGGCGGCCA ATCAAGGTCT TTATAATGGA
TTTCTGGCCG CGGGCCTGTT CTGGGCACTT CTGCATCCGC TGCCGGCCAT GGGGCTCCAG
CTCAAGGTAT TTTTTCTTGG CGCTGTGGTG GTTGCTGGCC TATATGGGGG GAGGACCGTG
TCGCGGCGGA TCTTCTTCGT CCAGGCCGCG CCGGCAGCGA TTGCCCTGTT TTTGGTTTTA
CTGGCTGGAT AA
 
Protein sequence
MTIFLIATVL VVLVMLEHIY IMVLEMFLWT TPRARKIFRK SLQGAETTRV MAANQGLYNG 
FLAAGLFWAL LHPLPAMGLQ LKVFFLGAVV VAGLYGGRTV SRRIFFVQAA PAAIALFLVL
LAG