| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0981 |
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| Symbol | |
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| ID | 7387081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 829915 |
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| End bp | 831204 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650489 |
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| Product | ring hydroxylating dioxygenase alpha-subunit |
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| Protein accession | YP_002548697 |
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| Protein GI | 222147740 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.978274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCCGC GCCGGTTGGA AAACGAGGGT ATCATGGATA TTCACAGCAC CGTTCTGCGC
CAGCTGAAAA ATCGCCGCGA AGGCTATAGT CTGGAACAGC CCTTCTATAT CGACAAGGAT
TACTTCAAGC TCGATATGGA ATTGATCTGG TATCGTGACT GGCTGTTCAT GGGTCATGAT
TGCGAAATTC CGAGAGCCGG CAATTATTTT ACCGTGCAGA TCGGTGATTA TCCTGTCGTG
GTCGTGCGCG GGCGCGATGG AGTGATCCGT GCTTTCCACA ATACCTGTCG TCACCGCGGC
CACCGGGTCT GCACGCAGGA GCGTGGCGCG TCGGCCAAGC TCGTCTGTCC CTATCACCAG
TGGACCTATG ATCTGGATGG CTCGCTGGTG TTTGCCCGCC AGATGGGCGA GGATTTTGAC
AAGAGCCAGC ATGGCATGAA GCCGGTCGCC TGCGAAAGCT TTGGCGGCTA TATCTTCATC
TGTCTGGCAG AGGTGCCGGA GGATTTCGCC AGCTTCCGCG CCACAGCCTT GCCCTATCTT
CAGCCGCACC GGCTCAGCGA AGCCAAGATT GCCCATCGCA ACACCATTGT CGAAAAGGGC
AATTGGAAGC TAGTTTGGGA AAACAACCGG GAATGCTACC ATTGCGCCGG CAATCACCCG
GAACTGTGCC GCACCTATCC GGAAGCACCA AGCGCCACCG GCGTGCAGGG CGCGGGCGAC
GATCCTGTGA TTACCGAGCA CTGGCAGCGG TGCGAGGCGG CTAACCTGCC CAGCGCCTTC
ACCATGCATC AGAGCGGCCA GTTCCGTGTT GCCCGCATGC CGCTGGTGCA GGATGCTGAA
AGCTATACGA TGGACGGCAA GCGGGCCGTC AAGCGTCCGC TGTCGGATGA TGTGACCATC
TCCCATATCG GCACGATGCT GATGTTCCAC TACCCGACCA CCTGGAACCA TCTGCTTGGC
GACCACGCTA TCACCTTCCG CGTCCTGCCC TTGAGTGCCG AGGAAACCGC CGTCACCACC
ACCTGGCTGG TGCATAAGGA TGCGGTGGAA GGCGTGGATT ACAATCTCCA CGACCTCACC
CATGTCTGGA ACATGACCAA CGACCAGGAC CGGTCGATTG TCGAGGAAAA TGCCTTCGGC
ATCCGCTCTC CCGCTTACGA GCCCGGTCCC TATTCGCCGG ATCATGAGGG CGGCGTCATG
CAGTTCATTG AATGGTATGC GAATTTCATG GTTGACCGTC TGGACGGCGA AACCGCCTCG
CGGAAATCCC CCCTGTCGGT CGTGGCCTGA
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| Protein sequence | MLPRRLENEG IMDIHSTVLR QLKNRREGYS LEQPFYIDKD YFKLDMELIW YRDWLFMGHD
CEIPRAGNYF TVQIGDYPVV VVRGRDGVIR AFHNTCRHRG HRVCTQERGA SAKLVCPYHQ
WTYDLDGSLV FARQMGEDFD KSQHGMKPVA CESFGGYIFI CLAEVPEDFA SFRATALPYL
QPHRLSEAKI AHRNTIVEKG NWKLVWENNR ECYHCAGNHP ELCRTYPEAP SATGVQGAGD
DPVITEHWQR CEAANLPSAF TMHQSGQFRV ARMPLVQDAE SYTMDGKRAV KRPLSDDVTI
SHIGTMLMFH YPTTWNHLLG DHAITFRVLP LSAEETAVTT TWLVHKDAVE GVDYNLHDLT
HVWNMTNDQD RSIVEENAFG IRSPAYEPGP YSPDHEGGVM QFIEWYANFM VDRLDGETAS
RKSPLSVVA
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