| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0941 |
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| Symbol | ispE |
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| ID | 7387730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 790279 |
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| End bp | 791151 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650458 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_002548666 |
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| Protein GI | 222147709 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTAT TTCGTGAAAT TGCAGCGGCA AAGATCAATC TTGCCCTGCA TGTCACGGGC
AGACGGGATG ATGGCTACCA CCTTCTCGAT ACGCTCGTGA CATTTGCCGG ACATGGCGAC
GTGATCACCG TTGAAGCGGC CCGACAGGAT GAATTTACCC TGTCGGGGCG CTTCGCAGGC
CAGCTTCAGT CGGAGGATCC GGCTGGAAAC CTGGTTATTC GGGCGCGGGA TCTGTTGCGA
ACAGCCACTC TGGCCAAGGG CCTGCCTGCC CCGTCCGTTG CCATCTCCTT ACAAAAAAAT
CTGCCAATTG CGTCCGGCAT TGGTGGCGGT TCAGCCGATG CCGCAGCCAC GCTGAGGGCT
TTGCAGCACC TATGGGAAAG CCATCTTGAG CCAGCCGCCT TGGAGGATCT GGCCCTAAAG
CTGGGAGCAG ATGTGCCGAT GTGCCTTGCA AGCACATCCT TGCGCGCCAC AGGCATTGGC
GAAGACCTGA CACCCCTGCC GGCCTTGCCA CGCTTTGGCC TCCTGCTCGG CAATCCGTTG
CAGGCGGTGT CCACACCAGC GATCTTCAAG GCGATGACCA GGCGCGACAA TCCACCGATT
GGCCCGCTGC CAACGCTGAT GGACCAAGAC CCATGGATAG AGACGCTCCG CCGATTGCGT
AATGATCTGC AACCCGCCGC CGAAACCTTG TGTCCGCACA TTGCCGAGCT TTCCCGGATG
ATCGAAGCAA CCGGCGCGCT TGTCACCCGG ATGTCCGGCT CCGGCGCCAC CTGTTTTGGC
CTTTACCCCA CCTATGACGC TGCATTTGCC GCTGAAAAAG CGCTTCTCAC GGCGCGGCCG
GATTGGTATT TTCAGGCGAG CCAGACCCTA TAG
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| Protein sequence | MTVFREIAAA KINLALHVTG RRDDGYHLLD TLVTFAGHGD VITVEAARQD EFTLSGRFAG
QLQSEDPAGN LVIRARDLLR TATLAKGLPA PSVAISLQKN LPIASGIGGG SADAAATLRA
LQHLWESHLE PAALEDLALK LGADVPMCLA STSLRATGIG EDLTPLPALP RFGLLLGNPL
QAVSTPAIFK AMTRRDNPPI GPLPTLMDQD PWIETLRRLR NDLQPAAETL CPHIAELSRM
IEATGALVTR MSGSGATCFG LYPTYDAAFA AEKALLTARP DWYFQASQTL
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