Gene Avi_0904 details

Gene Information

• Locus tag: Avi_0904
• Symbol: kefB
• ID: 7387707
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 764570
• End bp: 766396
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643650435
• Product: glutathione-regulated potassium-efflux system protein
• Protein accession: YP_002548643
• Protein GI: 222147686
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0475] Kef-type K+ transport systems, membrane components
• TIGRFAM ID: [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACCG CACCCACCCT GTTGTTTACC GAGGCTCTCG TACTTTTGGG CGGCGCCGTG 
GTCGCGGCAC CGATTTTCCG CAAGCTCGGC CTTGGCACGG TGCTCGGCTA TTTGGCGGCA 
GGTGCCGTCA TCGGTCCTGT CGCCCATGTC ATCACCGGGG CGGAGGAAAT CCTCTCGGTT 
GCCGAGCTGG GCATCGTCTT TCTGCTGTTC GTCATCGGGC TGGAGCTGAA ACCATCGACC 
CTGTGGAAAA TGCGCGCCGA TATTTTCGGT CTCGGCACAG CTCAGGTAGT GTTGGGCGGT 
GCATTGTTGA CAGGGGTGGC GCTGGCCTTT GACCTTCTTG ACTGGCGTGG TGCGGTGATT 
GCAGGTTTTG GCCTGTCGCT CTCTTCCACG GCGTTTGCCT TGCAGATCCT CAATGATCGC 
AGCGATTTGA ACAGCCAATA TGGCCAGCGC ACCTTTTCTG TCCTGCTGTT TCAGGATCTG 
GCGATCGTGC CGTTGCTGGC GTTGATTTCC ATTCTCGGCG CTCAGGCGGC GCCTGCGCCC 
GGCTCACTGT GGATCGATAT CGGTGTGGCC GTCACGGCGA CGCTGGCGAT GATCCTGGCA 
GGGCGCTACC TGCTCAATCC GCTGTTTCAG GTGATGGCCC GCACCGGCGC TCGTGAGGTG 
ATGATTGCCG CGGCTCTGTT CATCGTACTC GGATCGGCGA TGCTGATGCA GGCGGTCGGC 
CTGTCCATGG CCATGGGGGC CTTTCTGGCT GGCGTTATGC TGGCCGAATC CTCCTATCGT 
CATGAGTTGG AAGCCGATAT CGAGCCATTT CGCGGCATTC TCCAAGCTTT GTTTTTTATG 
GCGGTGGGCC TGTCCGTGCA ATTTGACGTG ATTTTTGCCA ATCTCTGGCT GTTGGCCGTG 
GCCGTGCCGG TGGTGATGCT GATCAAGGCG TTGAGCATCT ATGGCCTGTG CCGGTTGGCA 
GGCTCCCGCC ATGATGACGC CATTCGTATT GCCGCCATCC TGCCGCAGGG TGGTGAATTC 
GGTTTCGTGC TGTTTACCAC CGCCGTTTCT GCGGGCGTGT TTTCCAGTGC GACGTCCTCG 
CTGCTGATTT CCATCGTCAC ACTTACCATG GCGCTGACGC CGGTGGTCGC GGCGCTCTCC 
TCACGGCTGT TGTCGCGCGA CCAGCACGAG GAACTGGACG AGGATTTCGA TGGTGCCGGT 
TCGGATGTGT TGATGATCGG CTTTTCGCGT TTTGGCCAGA TCGCCGCCCA GGTCTTGCTG 
GCCAGTGGCC GGGACGTGAC GATCATCGAC GATTCCGCCG ACCGTATTCG CCAGGCCGCC 
TCCTTCGGGT TTCGCATTTA TTTCGGGGAT GGCACGCGGC TGGACATGTT GAGGGCCGCT 
GGCATCGAAA AGGCCAAGGT GGTCGCGGTC TGTACGCAGA AGCGGGAGGT TACCGACCGG 
ATCGTCGAAC TGGTCGCCTC CGAATTTCCC CAGGCGCGGC TGTTCGTGCG CTCCTATGAT 
CGTGTTCACA GCCTGTGGTT GCGGGCGCGC AATGTCGAAT ATGAACTGCG CGAAACGGTG 
GAATCAGGCT TGAAATTTGG CCGCAAGACC ATCGAGGCCC TGGGTGTGGA TGAGGACATG 
GCCGAGGCCA TCGAGGCCGA TATCCGCCGC CGCGACGATG AGCGTCTGCG CATTCAGGCG 
GTGGAAGGCA TCAAGGGCGG CGCCCATATG CTGTATAACA GGCCTGTCCA GCCGGAACCG 
CTGATCAAAC CCAAGCGGGG ACATGAGACG GAGAAAGATC AGGACAAAGA CAAAGAGAGG 
GAAAAAGACC GGGATACGGC TGCTTAG 

 

Protein sequence

MSTAPTLLFT EALVLLGGAV VAAPIFRKLG LGTVLGYLAA GAVIGPVAHV ITGAEEILSV 
AELGIVFLLF VIGLELKPST LWKMRADIFG LGTAQVVLGG ALLTGVALAF DLLDWRGAVI 
AGFGLSLSST AFALQILNDR SDLNSQYGQR TFSVLLFQDL AIVPLLALIS ILGAQAAPAP 
GSLWIDIGVA VTATLAMILA GRYLLNPLFQ VMARTGAREV MIAAALFIVL GSAMLMQAVG 
LSMAMGAFLA GVMLAESSYR HELEADIEPF RGILQALFFM AVGLSVQFDV IFANLWLLAV 
AVPVVMLIKA LSIYGLCRLA GSRHDDAIRI AAILPQGGEF GFVLFTTAVS AGVFSSATSS 
LLISIVTLTM ALTPVVAALS SRLLSRDQHE ELDEDFDGAG SDVLMIGFSR FGQIAAQVLL 
ASGRDVTIID DSADRIRQAA SFGFRIYFGD GTRLDMLRAA GIEKAKVVAV CTQKREVTDR 
IVELVASEFP QARLFVRSYD RVHSLWLRAR NVEYELRETV ESGLKFGRKT IEALGVDEDM 
AEAIEADIRR RDDERLRIQA VEGIKGGAHM LYNRPVQPEP LIKPKRGHET EKDQDKDKER 
EKDRDTAA