| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0861 |
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| Symbol | |
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| ID | 7387677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 735478 |
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| End bp | 736689 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650404 |
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| Product | phage phi-C31 gp36 major capsid-like protein |
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| Protein accession | YP_002548613 |
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| Protein GI | 222147656 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.456659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAA AGCCTGCTAT GGCACTGTCT GTGCTCGATG CTAACATCGG AACAGTCGTT
GCGACCGATA CGCTTGGTGA GCGTTTCGTA ACCCGCGCCG ATCTGCTCGA AACCCGTGAA
GAGCCGAACG ACGATCCGAT GGAACTGGCG ACCCGCGCCG TCGATGAAAT GCGCACGGCG
TTCACCACCA GCCTTGACGA AATGCGCACC CAGATCACGG ACCTCGAAAC CCGCATGAAC
CGTCCGGGGG GCGTGGGCGC AATCCAGACC ACGGGTGAAG TGACCCTTGA GCGCCGCGCC
TTCACCAATT TCTTGCGCCG GGGCCGTGAG GCCATGGAAG CCGAAGAGGT GCGGGCGCTG
GTGGTGGGTG ACGACACCAA GGGTGGCTAT CTCGCCCCTG CCGAGTTTCA GGCGGAAGTG
ATCAAGGGCG TTGTCGAGCT GTCTCCGATC CGCCAGGCCG TCCGGGTTGG TTCGACCGGG
GCCGGTTCCG TGATCCTGCC CAAGCGTACG GGCCGTCCCA CAGCGTCATG GGTTGGCGAG
GATGAAGAGC GCGAAGAAAC CACGATGTCC TATGGGCAGC TCGAAATCCC TGTTCATGAA
ATCGCCTGCT ACATCGACGT ATCGCAGCGC CTTCTTGAGG ACAGTGCCAT CAACGTTGAA
AGCGAAGTTG CCACCGATCT TTCGGAAGAA TTCGCCGTCA AGGAAGCGTC TGCATTCTCA
AATGGCAACG GTGTGAAGAA GCCGCTCGGT CTCCAGAATG CCCCCGGCAT TGCCGAAATC
ATCAACGGCA ACGCCGCCAA TGTCAGCGGC GATAAGTTGA TTGCGCTCAT GTATGCGATG
CCAGCGCAAT ATCGCAACAA CGGCTCCTGG CTGATGAATG GCACAACGCT GGGCATTATC
CGCACCATGA AAGACGGGAA TGGGAACTAC CTCTGGCAGC CATCCTATCA GGCTGGCCAG
CCTTCGACCC TGTTGGGCCG TCCGGTGATT GAAGATCCAA CCATGCCGGA TATCGCCGCC
AATGCTTTCC CCCTGATGTA TGGCGATTTC TCCAAGGCCT ACCGGATCTA TGACCGGGTG
GGCATGTCGA TTTTGCGCGA TCCCTTCACC CAAGCCACCA AGGGCCTTGT CCGGTTCCAT
GCCCGCCGTC GCGTCGGTGG CGGCCCGGTT CTGACCGAGG CGCTGCGCAA GCTCAAAATG
GCCGCCGCCT AA
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| Protein sequence | MTKKPAMALS VLDANIGTVV ATDTLGERFV TRADLLETRE EPNDDPMELA TRAVDEMRTA
FTTSLDEMRT QITDLETRMN RPGGVGAIQT TGEVTLERRA FTNFLRRGRE AMEAEEVRAL
VVGDDTKGGY LAPAEFQAEV IKGVVELSPI RQAVRVGSTG AGSVILPKRT GRPTASWVGE
DEEREETTMS YGQLEIPVHE IACYIDVSQR LLEDSAINVE SEVATDLSEE FAVKEASAFS
NGNGVKKPLG LQNAPGIAEI INGNAANVSG DKLIALMYAM PAQYRNNGSW LMNGTTLGII
RTMKDGNGNY LWQPSYQAGQ PSTLLGRPVI EDPTMPDIAA NAFPLMYGDF SKAYRIYDRV
GMSILRDPFT QATKGLVRFH ARRRVGGGPV LTEALRKLKM AAA
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