| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0853 |
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| Symbol | ndh |
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| ID | 7386326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 729285 |
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| End bp | 730562 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650398 |
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| Product | NADH dehydrogenase |
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| Protein accession | YP_002548607 |
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| Protein GI | 222147650 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATC ATCACGTCGT GGTTGTTGGT GGCGGCTTTG GCGGGCTTCA GCTGGTCCAT
GATCTCAAAG GCAGCGGAGC GCGGATAACG CTGATTGATC GGCGAAACCA TCATCTTTTC
CAACCTCTTC TCTATCAGGT TGCAACAACC ATTCTGTCCA CGTCGGAAAT CGCCTGGCCA
ATTCGCCATC TCTATAGCGA CCGGCAGGAG GTTTCGACAT TGCTGGGTGA AGTCGGCGGC
GTCGATGTCG CTGCAAAGCA GGTCATGTTA CGCAGTGGGG CATCCATATC CTACGACACG
CTTGTTCTGG CCACCGGAGC GACCCATGCC TATTTCGGAC GCGATGAATG GGAGCCTGTG
GCACCGGGCC TGAAGACGCT TGAGGATGCC ACGACAATTC GCCGCCGCCT CCTTCTTGCC
TTCGAGCAGG CAGAAACCAC CTCTGACCCG GCGATGCGTG AGGCGCTTCT GACCTTCACC
ATTGTTGGGG CCGGCCCAAC AGGCGTCGAA CTTGCCGGTA TTATCGCCGA GCTGGCGCAC
AAGACTCTCC CCAAAGAATT TCGCGCCATC GATACCCGCA GGACAAAAGT GATCCTGGTC
GAGGCGGGCC AACGTGTGCT GCCAAGCTTT GCGCCGGAAC TGTCTGTCTA TGCACAAGGC
GTGCTGGAAA ACCTCGGTGT TGAGGTTCGT CTTGGACAGC CCGTCACACA GTGCTCAAGC
GACGGCGTTC AGATTGGTGA ACAGTTCACT CCAAGCCGGA CGATCGTCTG GGCGGCTGGT
GTTCAGGCAT CAGCCGCTTC GCGTTGGCTT AGTGTTCCCG CCGACAGGGC GGGTCGCGTG
GTTGTAGGGA AGGACCTTAC CGCGCCAGAA ATGCCGGATG TTTTTGTGAT CGGTGATACG
GCGTCGGTTA TGCAAGGCAA TAACACGCCC GTACCAGGTA TTGCGCCTGC CGCCAAACAA
CAGGGCGCCT ATGTCGCCAA AGTGATCAAG GCTAGACTGA AAGGCAAACC CGCTCCCGCG
CCATTCCATT ACCGGCATCA AGGGAGCCTT GCCACCATCG GCCAGAGCGC GGCCATCGTT
GATTTTGGCA AGGTAAAGCT AACAGGTAGT CTCGCATGGT GGATATGGGG TCTCGCCCAT
ATCTATTTTC TTATCGGCAC GCGCTCAAGA CTCGCCGTTG CATGGAGCTG GTTGTGGATT
TATCTCAGCG GCCAGCATAG TGCCCGCCTG ATTACTCAAA AAGAGACGAT GAGGGATGAA
GGGCAGGCGA GAAAATAA
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| Protein sequence | MSDHHVVVVG GGFGGLQLVH DLKGSGARIT LIDRRNHHLF QPLLYQVATT ILSTSEIAWP
IRHLYSDRQE VSTLLGEVGG VDVAAKQVML RSGASISYDT LVLATGATHA YFGRDEWEPV
APGLKTLEDA TTIRRRLLLA FEQAETTSDP AMREALLTFT IVGAGPTGVE LAGIIAELAH
KTLPKEFRAI DTRRTKVILV EAGQRVLPSF APELSVYAQG VLENLGVEVR LGQPVTQCSS
DGVQIGEQFT PSRTIVWAAG VQASAASRWL SVPADRAGRV VVGKDLTAPE MPDVFVIGDT
ASVMQGNNTP VPGIAPAAKQ QGAYVAKVIK ARLKGKPAPA PFHYRHQGSL ATIGQSAAIV
DFGKVKLTGS LAWWIWGLAH IYFLIGTRSR LAVAWSWLWI YLSGQHSARL ITQKETMRDE
GQARK
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