| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0711 |
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| Symbol | |
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| ID | 7388736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 612093 |
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| End bp | 613340 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643650299 |
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| Product | Capsule polysaccharide export protein |
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| Protein accession | YP_002548509 |
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| Protein GI | 222147552 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3524] Capsule polysaccharide export protein |
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| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGAGG CGGACCTGCC TCCCGTGCTT GCGCGCAGCC AAAAACTGGC GTCCGCGCTG
AGTTCCTATG CACGTGCCCT GACGTTTGAA AACCGAAGCC GCCGCAATCT CTACCGGCTT
GCAGGTCTAG CGCCCCGGAC ACGCGACCGG GTTTTTGCCG TCATCTTGAT GATCTTTATC
GGTGTGACAT TCGTTTTGCC GATGAGTGGC AGTATCCTCT ACTATGCTTT TCTTGCAAGC
CCCGGATATG CTTCGGAAGT ACGGTTCATC GTGCGTTCCT CCGTTCCTTA TCTGTCGCGC
GACCGGTATT CGAGTGATGC GGTCGAGCCA AAGATGAAAA TTGTCCAGGA CACCGCCATC
CTCCTGAACT ATCTCAGCAG CCCGGCGGTC ATCCAGGATT TGCAAAAATC TGTCGATCTT
CACAAAATCT ATGGTCGAGA CGACATTGAT TGGTTTTCTC GTCTTCGAAA AGACGCCACC
CAGGACGACA TCCTCAAATA CTGGAAAAAG CGATATAGTG CCTCGGTAAA CGCGAAAAGC
GGCATTGTGG AGCTGGAGGT CACCGCTTTT ACCCCACAAG AAGCGCATGA CCTGTCAAAA
TTGGTCCTGA AGCTTTCCGA GCAGCAGATC AACCAACTGA GTTCGGGAAT GTGGGATGAC
CTTCTGGTCT CGACGCAGCG GGATGTGGAC AATGCGACGA AGGAAGTCAG TGAGCTGCGT
GGGAAGCTTC GCGATACGCA GAATCAAACA GGCGTTTTCG ATGTAGATCT GTCGGCCACC
AGCATCATTA CCGTGTTGAC CAATATCGAA TCGAGTATTG CCGACCTGAA AAGCCGCCGC
ATGGCTCTCA GCCAGAGCGT TAGCGCGAGT TCTCCGCAGG TGGCCGATAT CGACAGGCGC
ATCGCAGCAC TCGAGGAACA ATCCAAAAGC ATGCAGGCTA AAACTGCGGG CCTTTCGACA
GGTGCCGATG GCAATCTCGC CGATTATTCA AGCCTGTTCA ACAAGCTTAA CCTTGATCTG
AAAATGGCAG AAAGCCGCAT GAAATCGGCA ATCAGCGACT TCGAAAAAGT GAAGCTGGTC
AGCTCTCTGC AACTTGTCTA TCTTGACAGT TTTACCGATT CAACACTGCC TGACACCAAC
AAATATCCAA GTACCGGTCT GAACCTGTTC CTGAGTTTGC TGGCCTTTGG CGCTATCTGT
GGCGCAGCGT GCGGAACAGT GCTGCTTGTT CGCAAGAAGC TCGACTGA
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| Protein sequence | MLEADLPPVL ARSQKLASAL SSYARALTFE NRSRRNLYRL AGLAPRTRDR VFAVILMIFI
GVTFVLPMSG SILYYAFLAS PGYASEVRFI VRSSVPYLSR DRYSSDAVEP KMKIVQDTAI
LLNYLSSPAV IQDLQKSVDL HKIYGRDDID WFSRLRKDAT QDDILKYWKK RYSASVNAKS
GIVELEVTAF TPQEAHDLSK LVLKLSEQQI NQLSSGMWDD LLVSTQRDVD NATKEVSELR
GKLRDTQNQT GVFDVDLSAT SIITVLTNIE SSIADLKSRR MALSQSVSAS SPQVADIDRR
IAALEEQSKS MQAKTAGLST GADGNLADYS SLFNKLNLDL KMAESRMKSA ISDFEKVKLV
SSLQLVYLDS FTDSTLPDTN KYPSTGLNLF LSLLAFGAIC GAACGTVLLV RKKLD
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