Gene Avi_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0659 
Symbol 
ID7388700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp570317 
End bp570907 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content61% 
IMG OID643650265 
Producttranscriptional regulator TetR family 
Protein accessionYP_002548475 
Protein GI222147518 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCCA GCGAAACCCG CCAGCAGATC GTGGATGTCG CCGACCGGCT CTTCTACGAG 
TCTGGCTTCG AAGCGACATC GTTTGCCGAT ATCGCCAAGG ATGTGGGCCT CTCTCGCGGC 
AATTTTTACT ACCACTTCAA GACCAAGGAC GAGATTCTCG ACGCGGTTAT CACGCAGCGC 
ATGGCAAATA CCCGCGCCAT GCTGGAGGCC TGGGAGCACG CTGCGGCTTT CCCCACAGAC 
TGCATTCGCA ACTTCGTCCA TATCCTCATC ACGAACCGAG CCAAGATCAT GGCCTATGGC 
TGCCCGGTCG GCACGCTCTG CAACGAGCTG GCGAAGCTGG ATCACCTAGC GAAGGACGAT 
GCTACCGGTC TGTTCACCTT GTTCCGCGAC TGGCTCCGCC GGCAGTTCAC TAGGCTCGGG 
CGCGAAGCGG ATGCCGATGC GCTGGCCCTC CACGTTCTGA TGGGCAGCCA GGGCGTCGCG 
ACGCTCGCCA CCGCCTTCAG GGACGAAGAG TTTATCCGCC GCGAAGTCGC GGACATGGAG 
GCGTGGCTGC TCGTCCAATG TCCGGTCGGT TCAGCCCCCA ATGTCCATTA A
 
Protein sequence
MGASETRQQI VDVADRLFYE SGFEATSFAD IAKDVGLSRG NFYYHFKTKD EILDAVITQR 
MANTRAMLEA WEHAAAFPTD CIRNFVHILI TNRAKIMAYG CPVGTLCNEL AKLDHLAKDD 
ATGLFTLFRD WLRRQFTRLG READADALAL HVLMGSQGVA TLATAFRDEE FIRREVADME 
AWLLVQCPVG SAPNVH