| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0627 |
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| Symbol | rfbG |
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| ID | 7388677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 545059 |
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| End bp | 546159 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643650239 |
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| Product | CDP-glucose 4,6-dehydratase |
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| Protein accession | YP_002548451 |
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| Protein GI | 222147494 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAGC TGGTGATGAT GATCGACCGA CAGTTCTGGG CCGGAAAACG GGTGCTGCTG
ACCGGCCATA CCGGCTTCAA GGGCAGCTGG CTGGCGCTTT GGCTGACGCA AATGGGCGCC
CAGGTCAGCG GTCTGGCGCT TGCGCCACAG ACTACACCCA ACCTGTGCGG CCTGTTGACC
GGTCATGATA ATCACGCCGA GGGCGGCATT TGCGATCTGC GTGACCGTAT TGCGGTGGCG
GCCCTCGTTG CCCGGATAAA GCCGCAGATC GTCTTCCATC TGGCCGCCCA GCCGCTGGTG
CGGCTTGGCT ACCGCGATCC CGTGGCGACC TTTGAGACCA ATGTGCAAGG CACGGTGCAT
GTGCTGGAAG CGCTTCGGAT TTCCCCGGAT GTGAAGTCCA TCGTCGTCAT CACCACCGAC
AAGGTCTATG AGAATGCCGA GACCGGCAAG GCCTTTGTCG AGACCGATCC GCTCGGCGGT
CATGATCCCT ATAGCGCCAG CAAGGCGGCG GCAGAGATCG TCGTCTCCAG CTACCGGTCG
TCGTTTTTTG CCGCACGCGG CGTCGGTCTT GCCACGGCGC GGGCCGGCAA TGTCATCGGC
GGTGGCGATT GGGCTGAGGA CCGGTTGATC CCGGATGCGG TGCGCGCCTG GAGCCTCGGT
GCGCCGCTCG ACGTGCGCCG CCCGAACGCG GTCCGCCCCT GGCAGCATGT GCTGGAGCCC
TTGGCAGGTT ACATCGCCAT GGCGCACCAT CTGTGGCATG ATCCGGCTTC GCTGACAGCG
TTAAATTTTG GTCCTGACCA CGCCAGTGCG GCCTGCGTTG CGGATGTTCT GGCTCTGGCC
GTCAGGCATT TCGGCAGCGG TGAGGTGGTG CTGGGCGATG GCCGCGATGG TCCCCATGAA
GCTGGCTATC TGATGCTCGA CAGCTCCAAA GCTTGCATGA CACTCGGCTA CAGGCCGCTC
TGGTCGCTGG AGGAAACGGT GGCGCGGACC ATGAACTGGT ATCGACGGCT CGCCGCTGGC
GCATCGGCAA GAGACCTGTG CCTTGCCGAT ATCGCCGATT ATGCCCATGG TCTTGGCATG
GATGTGAGGC GGGCGGGATG A
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| Protein sequence | MEELVMMIDR QFWAGKRVLL TGHTGFKGSW LALWLTQMGA QVSGLALAPQ TTPNLCGLLT
GHDNHAEGGI CDLRDRIAVA ALVARIKPQI VFHLAAQPLV RLGYRDPVAT FETNVQGTVH
VLEALRISPD VKSIVVITTD KVYENAETGK AFVETDPLGG HDPYSASKAA AEIVVSSYRS
SFFAARGVGL ATARAGNVIG GGDWAEDRLI PDAVRAWSLG APLDVRRPNA VRPWQHVLEP
LAGYIAMAHH LWHDPASLTA LNFGPDHASA ACVADVLALA VRHFGSGEVV LGDGRDGPHE
AGYLMLDSSK ACMTLGYRPL WSLEETVART MNWYRRLAAG ASARDLCLAD IADYAHGLGM
DVRRAG
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