| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0626 |
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| Symbol | rfbF |
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| ID | 7388676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 544304 |
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| End bp | 545074 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650238 |
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| Product | glucose-1-phosphate cytidylyltransferase |
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| Protein accession | YP_002548450 |
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| Protein GI | 222147493 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCGG TTATCCTGGC TGGCGGTCTC GGCACGCGGA TTTCCGAAGA GACCCATTTA
CGGCCAAAGC CGATGATCGA GATCGGCGGG CGGCCGATCC TCTGGCACAT CATGAAGCTC
TATTACGCTC ATGGCATCCG TGAATTCATC ATCTGCTGCG GGTTCAAGGG CTATATCATC
AAGGAATATT TCGCCAATTA CGGTCTGCAT ATGTCGGATA TCACCTTTGA TCTCTCCGAT
AACCGGCTGG AATTTCACCG CAAGAGCGCC GAAAACTGGC GCGTGACCCT GATCGATACC
GGTGAAAGCT CGATGACCGG GGGACGGCTG AAGCGGGTTG CTTCCTATCT GAAAGACGAG
GAAGCGTTCT GCTTTACCTA TGGCGACGGC CTCTCCGATC TGGATATTTC CGCCACGCTG
CGGTTTCACA AGGAACATGG CAAGCTGGCC ACGGTCACCG CCGTGCAGCC GCCCGCCCGC
TACGGCGCCC TGAAAATGGA CGGACCGATG GTGCGTGGCT TCGTGGAAAA GCCGGTGGGC
GAGGCGGGCT ATATCAATGG TGGTTTCTTC GTGCTGTCGC CCAAATGCAT CGACCGGATC
GCCGGTGACG ACATGCCTTG GGAAGCCGAA CCACTGACCA GCCTTGCCGA AGACGGCGAG
CTTTGCGCCT ATCTGCATAA CGGTTTCTGG CAGCCGATGG ATACGCTGCG TGACAAGAAC
CATCTGGAAG ATCTGTGGGC CGGTGGTAGC CCGCCATGGA AGAGCTGGTG A
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| Protein sequence | MKAVILAGGL GTRISEETHL RPKPMIEIGG RPILWHIMKL YYAHGIREFI ICCGFKGYII
KEYFANYGLH MSDITFDLSD NRLEFHRKSA ENWRVTLIDT GESSMTGGRL KRVASYLKDE
EAFCFTYGDG LSDLDISATL RFHKEHGKLA TVTAVQPPAR YGALKMDGPM VRGFVEKPVG
EAGYINGGFF VLSPKCIDRI AGDDMPWEAE PLTSLAEDGE LCAYLHNGFW QPMDTLRDKN
HLEDLWAGGS PPWKSW
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