Gene Avi_0616 details

Gene Information

• Locus tag: Avi_0616
• ID: 7389003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 533991
• End bp: 534719
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643650231
• Product: hypothetical protein
• Protein accession: YP_002548443
• Protein GI: 222147486
• COG category: [R] General function prediction only
• COG ID: [COG1407] Predicted ICC-like phosphoesterases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.877239
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGGAT TGACGACAGC TTCTATAATG CGCCCGGAGA AGACGGACCT CACCGCCGAG 
ATCGAGATCT GCGGTGTCGA GGCCATCTGT GACCTGTCCG GCACGCTGTA TCTGCCAGCA 
TTGCGATTGC TCGTCGTCTC CGACCTGCAT CTGGAAAAGG GGGCTGCCTT TGCGCGGCGT 
GGCCAGCTTC TGCCCCCCTA TGATACCCTT GCGACATTGA AAAAACTGCA AGCGGTGATT 
GCCCGTTTCG ATCCGGCCAT CGTCGTCAGT CTGGGTGACA CATTTCATGA CCGGTTGGGG 
TCTGCCCTGA TGCCGGAACC CTTCCGGCAG ACACTTGAGC AGATGTCACG AGGCCGCGAG 
TGGATATGGA TTACCGGCAA CCATGATCCT GATGGGGTCG AGAACCTGGC GGGCATGGTG 
GCCGATGAAA TTTCCTATGG CGGATTGGTG TTTCGCCATG AACCGCAAAT CGGTGAAAGC 
GCCAGAGGCG AGATTGCCGG CCATCTTCAT CCGTCAGCCA CCGTACGCCG GCGGGAGAAA 
TCCGTGCGTC GCGCCTGTTT CGCCGCCGAT GGCGACCGGC TGATCATGCC GGCTTTCGGG 
GTGACGACGG GCGGGCTGGA TTTGAAGCAT AAGGCGTTCG CAGGGCTTTT CGCAAGGGAG 
ACGCTGGTCG CGCATCTTCT GGGCCGCGAA CGGATCTATT CGGTGCGCTT CAGCGGCCTG 
TTCGCCTGA 

 

Protein sequence

MTGLTTASIM RPEKTDLTAE IEICGVEAIC DLSGTLYLPA LRLLVVSDLH LEKGAAFARR 
GQLLPPYDTL ATLKKLQAVI ARFDPAIVVS LGDTFHDRLG SALMPEPFRQ TLEQMSRGRE 
WIWITGNHDP DGVENLAGMV ADEISYGGLV FRHEPQIGES ARGEIAGHLH PSATVRRREK 
SVRRACFAAD GDRLIMPAFG VTTGGLDLKH KAFAGLFARE TLVAHLLGRE RIYSVRFSGL 
FA