| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0555 |
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| Symbol | |
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| ID | 7388961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 473273 |
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| End bp | 474115 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650190 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002548402 |
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| Protein GI | 222147445 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGATT GGCAAGACCT TCGATATTTC CTCGCTGTCG CGCAGCACGG TTCTCTGACG
GCCGCTGCCC GGGTGTTGGG TGTTGACCAT GCCACGGTTG GCAGACGCAT CGCGCATCTT
GAAGCAACCA CGGGGCTGAA GCTGATTGAC CGTTTGCCAC GTGCGACGCG TCTGACCGTG
CATGGTCAAT CTCTGGCTGA GGCCGCTAAG GCGATGGAGC GCGGCGCAGA GGGGGTTCAT
CGCCATTTGC GCGGCAAAAG CACGGGTCTG TCGGGAAGTG TGGTGGTCAG TGCGCTGCCA
GTGATCAGCG CCTTTGTGAT CGCACCCAGC CTGTCACAGC TGCGATTAAA CCATCCCGAT
CTTCAAGTCG TCCTCTTGGC AAGCTCATCG GTTGCCTCCC TCGAAAAGGG GGAGGCTGAT
TTGTCTCTCG GCTTTGTCAG GCCACGGGCT GAAGGCCGTA TCGTGCGCGA GATGGGACTT
TTGCCGCTCG CTCTTTATGC GGCAAGCTCT CTTGCTGATA TGGCCATCGA GAACCAAAGT
TTTATTGGCT TTGAACAGAG CTTTGGCCAT ATTGAGCAGC AACGTTGGCT TGAAGACGTT
GCCGGGTCGC GGCCTTTTGC GCTGCGAACA AACGACGTCG TGACGCAGCA TCAGGCAGCC
CGTGCGGGTC TGGGCCTGGC ACTTCTGCCA TGTTTGTTGG GAGATGCAGA TGAGGGACTT
GTCAGAGTGG CGGTGGGTCG AGCAACACCC TCTCGCCAGC TCTGGTTGTC CGTGCACGCA
GATATCCGAA AATCTCCGGC GGTGCGTGCC GTAATGGATC ATTTGATCGA AACTTTCAAA
TAG
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| Protein sequence | MLDWQDLRYF LAVAQHGSLT AAARVLGVDH ATVGRRIAHL EATTGLKLID RLPRATRLTV
HGQSLAEAAK AMERGAEGVH RHLRGKSTGL SGSVVVSALP VISAFVIAPS LSQLRLNHPD
LQVVLLASSS VASLEKGEAD LSLGFVRPRA EGRIVREMGL LPLALYAASS LADMAIENQS
FIGFEQSFGH IEQQRWLEDV AGSRPFALRT NDVVTQHQAA RAGLGLALLP CLLGDADEGL
VRVAVGRATP SRQLWLSVHA DIRKSPAVRA VMDHLIETFK
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