Gene Avi_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0538 
SymbolfabG 
ID7388944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp458087 
End bp458884 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content59% 
IMG OID643650172 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_002548385 
Protein GI222147428 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCAGA ATAAACTGGA CGACAGTAAA CGTGTGGCGC TGGTCACCGG CGCGGGTTCC 
GGCATTGGGC GAGCAGCTGC CCTGCGACTT GCCCAGGATG GCTGCGCCGT CGGGCTACTG
GGGCGCACCA AACATGAGTT GGAACGGGTT GCCGAAGACA TCCATAACGC GAATGGCGAC
GCCATGGTGC TTGTCGCAGA TGTCGCTGAC AGCTCTTCCA TGCGGGCAGG GGTCGAAACA
TTGATCGCAT GGGGTGGCCG GCTCGATATC GTGGTGGCCA ATGCCGGGGT CAATGGTGTT
TGGGCACCAA TCGATGAATT GCAGCCGCAG GAATGGGACC AGACGATGGC CATCAATCTG
CGTGGCACCT ATTTGACGGT GCATCTGACA GTGCCGCATC TGCGCCGCAA TGGCGGTGGC
AGTATTGTCG TTGTCTCTTC TATCAACGGC ACGCGCACCT TCACATCTCC TGGCGCCACG
GCTTATAGCG CCACCAAGGC TGGGCAATTG GCCATGGTGC AGCAATTGGC GGTGGAATTG
GGCCCCGACC GCATTCGTAT CAATGCGGTT TGCCCAGGCG CCATCGAGAC TGAGATCGAT
GACAATACAA ACAAACGCTC TACTGAGCGG CTCGACATCC CACAGCCGCC GCCGCATCAC
GCGATTCCGT TGACGCGGGG TACGCCTGGC ACAGCCCAGG AAGTGGCCGA TCTGATTGGT
TTTCTGGCGT CCGATGCGGC TTGCCATATC AGTGGTACAC CCGTCTGGAT CGATGGGGCG
CAGAGTCTGA TACGATAG
 
Protein sequence
MHQNKLDDSK RVALVTGAGS GIGRAAALRL AQDGCAVGLL GRTKHELERV AEDIHNANGD 
AMVLVADVAD SSSMRAGVET LIAWGGRLDI VVANAGVNGV WAPIDELQPQ EWDQTMAINL
RGTYLTVHLT VPHLRRNGGG SIVVVSSING TRTFTSPGAT AYSATKAGQL AMVQQLAVEL
GPDRIRINAV CPGAIETEID DNTNKRSTER LDIPQPPPHH AIPLTRGTPG TAQEVADLIG
FLASDAACHI SGTPVWIDGA QSLIR