| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0523 |
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| Symbol | |
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| ID | 7388934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 445552 |
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| End bp | 446631 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650162 |
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| Product | Response regulator protein |
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| Protein accession | YP_002548375 |
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| Protein GI | 222147418 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGGTTG ATGATAACAA TACCAATTTG AAACTGCTGA CCCGCCTGGT CAAGAAAATC
GACCACTGCG AGCCCGTGGC CTTTTCAACC CCGGAAGAGG TGCTCTCCGC GCTGCCGGAG
CTGGATTTCG ATGTTGCCAT CATCGATTAC CAGATGCCGG TATATAACGG CGTCGAGCTT
TACACTGAGA TCGTAAGGTT CGAGAAATAT GCCCAGGTGC CGGTGGTATT CATCACCGCC
GACAAGGATA TGACAACGCG GATGGCCGCG TTGAATGCCG GGGCTATCGA CTTCCTGACC
AAGCCGGTTA ACCCGATCGA ATTCCAGGCC CGCATCCACA ATATCGTCAG CCTGTCGATT
GCCCGTCGTC AGCTGGCGGA CCAGGCTGAA TGGCTGCGAC GCGAAGTGGA CAGGGCCGTG
GGCGAGTTGC GGCAGCGCGA ACAGGAAATC ATTGAACGCC TGACGCTGGC AGCCGGCTAC
AAGGACCCGG ATACGTCGCG CCATACCTTG CGGGTCGCCG CCTATGCACA GGCCATCGCC
CGTGAAATGG GATTGCCGGA GCAGTTCTGC ACCGATCTGA AGCTGGCAGC GCCGATGCAT
GACATCGGCA AGGTCGCCAT GCCCGACACG GTCTTGCTCA AGCAGGGCAG GTTGACCGAA
TCCGAATATC GCCAGATGCA ATCCCACGCC CAGATCGGCA GTGACATTCT CGCCCAGTCT
CATTCCTCGC TGCTCCAGCT TGCCGCTGAA ATCGCCGCCA GCCACCATGA GCGCTGGGAT
GGGCAAGGCT ATCCCAACCG CCTGGCAGGC GATGCCATTC CCCTGTCCGG CCGGATCGTT
TGTATTGCCG ACAATTTCGA CGCCCTGACC ACTGAGCGCC CCTATAAGCC TGCCTGGTCC
TATGAACGGA CTGTGGAGCA TGTGTTGGCG CGGGCTGGAA GTCAGTTCGA CCCGGCCTGC
GTTGCCGCAT TTGAACGGGC GCTACCGGCA ATCCATGAGA TTATTGAGGC CGACCGGCGT
GAACAGGCCG AGGAAGCAGC CAGAAAGGCC GCTGCCCTGC CGTTGGACAA AATCGCCTGA
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| Protein sequence | MLVDDNNTNL KLLTRLVKKI DHCEPVAFST PEEVLSALPE LDFDVAIIDY QMPVYNGVEL
YTEIVRFEKY AQVPVVFITA DKDMTTRMAA LNAGAIDFLT KPVNPIEFQA RIHNIVSLSI
ARRQLADQAE WLRREVDRAV GELRQREQEI IERLTLAAGY KDPDTSRHTL RVAAYAQAIA
REMGLPEQFC TDLKLAAPMH DIGKVAMPDT VLLKQGRLTE SEYRQMQSHA QIGSDILAQS
HSSLLQLAAE IAASHHERWD GQGYPNRLAG DAIPLSGRIV CIADNFDALT TERPYKPAWS
YERTVEHVLA RAGSQFDPAC VAAFERALPA IHEIIEADRR EQAEEAARKA AALPLDKIA
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