Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0517 |
Symbol | |
ID | 7388928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 438328 |
End bp | 439734 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643650156 |
Product | hypothetical protein |
Protein accession | YP_002548369 |
Protein GI | 222147412 |
COG category | [S] Function unknown |
COG ID | [COG4782] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCTGA CCCGGGACGG ATATAGACCG GACCCGACAA TGATCAAGCC GCATGCCGAC CGATCCGCCC CTTGTCTTTC TGAAAACCCG TCTCTTCCTG AAAAGCAGAA CATCACAACT CTTCCCCGCC GCTCAAGGCG GCGTGGCCTC TCCATGTCCA TGCGCTTGGC GGCCCGGCCA CTCGCTATTA TCATGCTCGG CGTGCTGTTG GCGGGCTGCG CGTCGCGGGC GGTGGGCGTG ATGAAGCCGG TCGGCGCGGT TAAGGCCGCC AATGCCAGCG AGGTCAATCT CCTGGCTGCG ACGACCCGCG CCCCCTCCGA AGATAAATCG ATCCTGTTCA GCGGCGAGCG CGGAACGGGT CTGTTGATCG ATGCCGTCAC CATTTCGATT CCTCCCGCCG CAAACCGCAA GATCGGCGAG GTTCAATGGC CAAAGAAACT ACCGCCCGAT CCGCGCAAGG ACTTCACGAC CGTTGCCGTC CAGCCCATTC AGACCGACCA GCAGCGCCGG ACCTGGCTGA ACACTCACGC AAAGGGCAAG CACCGCGTGC TGCTATTCGT GCATGGGTTC AATAATACCT ACGAGGATTC CGTCTATCGC TTTGCCCAGA TCGTTCACGA TTCAGGGACG GATGTGGTGC CAATGGTGTT TACCTGGCCG TCTCGCGCCA GTATTTTCGA TTATAATTAC GACAAGGAAA GCACCAATTA TTCCCGCGAT GCCCTGGAAG AGATGCTGAC CCGCATGACC AGCGACCCGC AGGTCTCAGA TGTGACCGTC ATGGCCCATT CGATGGGATC GTGGCTTGCC GTTGAAGCGC TGCGGCAAAT GGCTATCCGC CATGGCGGGG TCAATGCCAA GATTACCAAT GTCATTCTTG CCTCTCCAGA TCTGGATGTT GATGTGTTCG GCAAGCAGTT TCAGGCCTTG GGGCCAAAGC CGCCACATTT CACGCTGTTT GTCTCCCAGG ATGACCGGGC GCTGAGTATT TCCCGGCGCA TTTCCGGCAA TGTCGACCGG CTGGGACAGA TCAATCCGGC CAATGAACCG TATCGAAGCG TGCTCGAAAA GGCTGGTATC ACCGTTCTCG ATCTGACCAA GCTGAAAACG GGTGATAGGC TGAACCACGG CAAATTCGCG GAAAGCCCGG AAGTGGTGCG GCTGATTGGT GGACGGCTGA TTGCCGGACA GACCGTCACG GATTCGCAGG TCGGTGTCGG CGAAGCCCTC GGGGCCGTCA CTATCGGCGC CACCAACACG ATCGGCCAGG CCGCCAGCAC CGCAATCAGT GCGCCGATCA TGATCTTCGA CCCACGGACC CGCCGAAACT ATGGTGACCA GCTGAAAAAG CTTGGCGAAA GCGCTGGCTC GACGGTTACC TCCGTCGGTG ACACAGTGCC ACGGTGA
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Protein sequence | MMLTRDGYRP DPTMIKPHAD RSAPCLSENP SLPEKQNITT LPRRSRRRGL SMSMRLAARP LAIIMLGVLL AGCASRAVGV MKPVGAVKAA NASEVNLLAA TTRAPSEDKS ILFSGERGTG LLIDAVTISI PPAANRKIGE VQWPKKLPPD PRKDFTTVAV QPIQTDQQRR TWLNTHAKGK HRVLLFVHGF NNTYEDSVYR FAQIVHDSGT DVVPMVFTWP SRASIFDYNY DKESTNYSRD ALEEMLTRMT SDPQVSDVTV MAHSMGSWLA VEALRQMAIR HGGVNAKITN VILASPDLDV DVFGKQFQAL GPKPPHFTLF VSQDDRALSI SRRISGNVDR LGQINPANEP YRSVLEKAGI TVLDLTKLKT GDRLNHGKFA ESPEVVRLIG GRLIAGQTVT DSQVGVGEAL GAVTIGATNT IGQAASTAIS APIMIFDPRT RRNYGDQLKK LGESAGSTVT SVGDTVPR
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