Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0479 |
Symbol | argF |
ID | 7388481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 407123 |
End bp | 408040 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650126 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_002548340 |
Protein GI | 222147383 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCCC CGAAACACTT CCTCGATCTC TCGGCCATGA CGTCCGAGGA CCTTCACTCT ATTCTGTCCG ACGCCCATCA GCGCAAGACC AGAACCCGGG CCGGAACAGC GGACAAGCCG CTGGCCGGCA AGATGCTGGC GATGATCTTC GAAAAGCCAT CGACCCGCAC CCGTGTTTCC TTCGATGTCG GCATGCGTCA ACTGGGCGGC GAGACGCTGT TTTTGTCCGG CACGGAAATG CAGCTTGGCC GCGCCGAGAC GATTGGCGAT ACGGCCAAGG TTCTGTCGCG CTATGTCGAT GCGATCATGA TCCGCACCAC TGATCACAAC CGCCTGCTGG AACTGGCCGA ACACGCCACC GTTCCGGTGA TCAATGCGTT GACCGACCTG ACCCATCCCT GCCAGATCAT GGCTGATATC ATGACCATCG AGGAACATCG CGGTCCGATC CGGGGCAAGA CGCTGGCCTG GACGGGCGAC GGCAACAATG TGCTGCATTC GCTGGTCGAA GGGGCGGCCC GCTTCGGCTA CCGGATGAAC ATGGCTGTGC CAATGGGCTC TGAGCCGGAA GACCAGATCC TCAACTGGGC GCGCAACAAT GGCGGCGAGA TCATGCTGTG CCATGATGCC GACCGCGCCG TGACCGGTGC CGATGCCGTC ATCACCGATA CCTGGGTGTC GATGAACCTG GAGCACAAGG CACGCGGCCA TAACGTATTC CAGCCTTTCC AGGTCAATCC CGCCCTGATG AAACAGGCAA AACCCGATGC GCTGTTCATG CACTGCTTGC CCGCTCATCG CGGTGAGGAA GTGACCGATG AAGTGATCGA CGGGCCGCAA TCAGTTGTGT TCGACGAGGC GGAAAACCGG CTACATGCCC AGAAGTCCAT TCTCGCCTGG TGCCTTGGCG CAGTATGA
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Protein sequence | MASPKHFLDL SAMTSEDLHS ILSDAHQRKT RTRAGTADKP LAGKMLAMIF EKPSTRTRVS FDVGMRQLGG ETLFLSGTEM QLGRAETIGD TAKVLSRYVD AIMIRTTDHN RLLELAEHAT VPVINALTDL THPCQIMADI MTIEEHRGPI RGKTLAWTGD GNNVLHSLVE GAARFGYRMN MAVPMGSEPE DQILNWARNN GGEIMLCHDA DRAVTGADAV ITDTWVSMNL EHKARGHNVF QPFQVNPALM KQAKPDALFM HCLPAHRGEE VTDEVIDGPQ SVVFDEAENR LHAQKSILAW CLGAV
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