Gene Avi_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0479 
SymbolargF 
ID7388481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp407123 
End bp408040 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content60% 
IMG OID643650126 
Productornithine carbamoyltransferase 
Protein accessionYP_002548340 
Protein GI222147383 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0078] Ornithine carbamoyltransferase 
TIGRFAM ID[TIGR00658] ornithine carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCCC CGAAACACTT CCTCGATCTC TCGGCCATGA CGTCCGAGGA CCTTCACTCT 
ATTCTGTCCG ACGCCCATCA GCGCAAGACC AGAACCCGGG CCGGAACAGC GGACAAGCCG
CTGGCCGGCA AGATGCTGGC GATGATCTTC GAAAAGCCAT CGACCCGCAC CCGTGTTTCC
TTCGATGTCG GCATGCGTCA ACTGGGCGGC GAGACGCTGT TTTTGTCCGG CACGGAAATG
CAGCTTGGCC GCGCCGAGAC GATTGGCGAT ACGGCCAAGG TTCTGTCGCG CTATGTCGAT
GCGATCATGA TCCGCACCAC TGATCACAAC CGCCTGCTGG AACTGGCCGA ACACGCCACC
GTTCCGGTGA TCAATGCGTT GACCGACCTG ACCCATCCCT GCCAGATCAT GGCTGATATC
ATGACCATCG AGGAACATCG CGGTCCGATC CGGGGCAAGA CGCTGGCCTG GACGGGCGAC
GGCAACAATG TGCTGCATTC GCTGGTCGAA GGGGCGGCCC GCTTCGGCTA CCGGATGAAC
ATGGCTGTGC CAATGGGCTC TGAGCCGGAA GACCAGATCC TCAACTGGGC GCGCAACAAT
GGCGGCGAGA TCATGCTGTG CCATGATGCC GACCGCGCCG TGACCGGTGC CGATGCCGTC
ATCACCGATA CCTGGGTGTC GATGAACCTG GAGCACAAGG CACGCGGCCA TAACGTATTC
CAGCCTTTCC AGGTCAATCC CGCCCTGATG AAACAGGCAA AACCCGATGC GCTGTTCATG
CACTGCTTGC CCGCTCATCG CGGTGAGGAA GTGACCGATG AAGTGATCGA CGGGCCGCAA
TCAGTTGTGT TCGACGAGGC GGAAAACCGG CTACATGCCC AGAAGTCCAT TCTCGCCTGG
TGCCTTGGCG CAGTATGA
 
Protein sequence
MASPKHFLDL SAMTSEDLHS ILSDAHQRKT RTRAGTADKP LAGKMLAMIF EKPSTRTRVS 
FDVGMRQLGG ETLFLSGTEM QLGRAETIGD TAKVLSRYVD AIMIRTTDHN RLLELAEHAT
VPVINALTDL THPCQIMADI MTIEEHRGPI RGKTLAWTGD GNNVLHSLVE GAARFGYRMN
MAVPMGSEPE DQILNWARNN GGEIMLCHDA DRAVTGADAV ITDTWVSMNL EHKARGHNVF
QPFQVNPALM KQAKPDALFM HCLPAHRGEE VTDEVIDGPQ SVVFDEAENR LHAQKSILAW
CLGAV