Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0477 |
Symbol | |
ID | 7388479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 404706 |
End bp | 405830 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643650124 |
Product | hydroxypyruvate reductase |
Protein accession | YP_002548338 |
Protein GI | 222147381 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2379] Putative glycerate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.34998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGCGG CCTTGGAGAC GCTGTGGGAC GGCCCGCTGG AAGGTGTTGT CGTTACTCGA TACGGCTATG GCTGCCCGCT CGCCCGTTTG GAATTGCTCG AAGCGGCGCA TCCGGTGCCC GATGCCAATG GTCTCGCCGC GGCTGAACGG CTGAAACACC TCGTTGCCCC GCTTGGTCCC GATGATCTGG TGATTGCCTT GATCTGCGGC GGCGGCTCGG CGCTGCTGCC CGCTCCGCCC GCCGGGATGA CGCTGGAAGA CGAGATCGAC CTCAACAGGC AATTGCTGGC CTGCGGTGCG CCGATCAGCG CGATGAACGT GGTGCGCAAA CACCTGTCCA CGATCAAGGG CGGAAGGCTA GCCGCCTTGA CCAAAGCGCC CGTCGTCAGT CTGATCGTTT CCGATATTCC CGGCGACAAT CCGGCGCATG TTGCTTCCGG CCCGACCGTG CCGGATGCCT CGACCCGTCA CCAGGCGCTA GAGATTGTTC GCGCCTATGG TTTGCGACTG CCACAGGCGG CATTGGACCA CCTGAATTCT CCAGGCTCCG ATGCGCCCCG GCCAGACGAT CCAGCCTTTG CGCGCAACCG GCATCATGTC ATCGCGTCAG CCAGCGTCTC GCTGGAGGCC GCAGCGCTGG CCGCTGAAGC GGCTGGCGTG CGCGCTGCAA TCCTGTCCGA CAGTATCGAG GGGGAGGCGC GTGATGTGGC TGGCGTTCAT GCCGCGCTGG CCCGTGAAAT CGCGGCTAAG GATCGGCCAT TTCCCAAGCC GGTCGTCTTG CTGTCCGGCG GCGAAACCAC GGTCACCATC AAAAACCAAG GAACGCAGGC CACAGGACGC GGTGGGCGCA ACAGCGCTTT CGCGCTGGCC ATGGCGCTGG GCATTGCTGG TCACGATATC GAGGTGCTTG CCGCCGATAC CGATGGCATT GATGGCACGG AAAACAATGC CGGTGCCTTT GCCGATGGCA CCAGCATTGT CAGGTTAAAA CAACAGGGTC TGGATGGCGC GGCCCTGCTT GATGCCCATG ACAGCTATAG CGCCTTTGAA GCGCTGGGCG ACCTGTTTGA AACCGGCCCG ACTGGCACCA ATGTCAATGA TTTCAGGGCA ATCCTGATCC GTTGA
|
Protein sequence | MAAALETLWD GPLEGVVVTR YGYGCPLARL ELLEAAHPVP DANGLAAAER LKHLVAPLGP DDLVIALICG GGSALLPAPP AGMTLEDEID LNRQLLACGA PISAMNVVRK HLSTIKGGRL AALTKAPVVS LIVSDIPGDN PAHVASGPTV PDASTRHQAL EIVRAYGLRL PQAALDHLNS PGSDAPRPDD PAFARNRHHV IASASVSLEA AALAAEAAGV RAAILSDSIE GEARDVAGVH AALAREIAAK DRPFPKPVVL LSGGETTVTI KNQGTQATGR GGRNSAFALA MALGIAGHDI EVLAADTDGI DGTENNAGAF ADGTSIVRLK QQGLDGAALL DAHDSYSAFE ALGDLFETGP TGTNVNDFRA ILIR
|
| |