| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0461 |
|---|
| Symbol | |
|---|
| ID | 7388468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 393399 |
|---|
| End bp | 394121 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643650113 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002548327 |
|---|
| Protein GI | 222147370 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC CGGATCAGAG CAAGGGGGAC CGCTCCAGGG ACGAGGTTCT GGCGGGGGAA
TATGTGCTCG GCGTGCTTTC GGCCCAAGGC CGCGTTGAGG TGGAGGCCCG GCTGAAGCGG
GATAGACCCT TCGCCGCCAT TGTCCAGCGC TGGGAGGAAA ACCTTTCACA GTTCAATGAC
GACTATGGCG TGGAATTGCC GCGGCCGGAA AGTTTCCAGA AGCTGGAAGC GCGGTTGTTT
ATCGACCGGA GCAACGGCCC GGCTGGTCCC TGGGCGAGGC TTTGGCATTC CGTCCCCTTC
TGGCGCGGCC TGTCGTTGAC CAGTCTGATC GCGGTCGCCA GCCTGGTCGG CGTCGAGCTT
GGCATGTGGG AAAGCCGTTA CGCGGTTCGT CCGCTGGTGG CAGATCTGCA AACTCAAAAT
GCAGATTTGT CGCTGGTTGC CAGCTATGAC AGGCAAAGTG GACGGTTGCG CGTCACGCCG
GTCGCGTCGC GTGCCGAAGG TCAGAAGTCG CTGGAATTAT GGATGGTCGA GGCGAATAAG
CCACCGCGCT CGCTTGGCGT GCTCCCGCAA TCGGGTGAGG GTGAATTCCT GGTTCCCGAC
AGCATGCGCC CACGTCTGAA GGATGGCGTC ACGCTCGCCG TCAGCATCGA GCCTTTTGGC
GGCTCGCCGA CGGGGATTGC CACTGGACCG GTGATCGCTT CCGGCAAAAC CCATATCCCT
TAA
|
|---|
| Protein sequence | MTTPDQSKGD RSRDEVLAGE YVLGVLSAQG RVEVEARLKR DRPFAAIVQR WEENLSQFND
DYGVELPRPE SFQKLEARLF IDRSNGPAGP WARLWHSVPF WRGLSLTSLI AVASLVGVEL
GMWESRYAVR PLVADLQTQN ADLSLVASYD RQSGRLRVTP VASRAEGQKS LELWMVEANK
PPRSLGVLPQ SGEGEFLVPD SMRPRLKDGV TLAVSIEPFG GSPTGIATGP VIASGKTHIP
|
|---|
| |