| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0454 |
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| Symbol | rnpA |
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| ID | 7388464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 389401 |
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| End bp | 389790 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650109 |
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| Product | ribonuclease P |
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| Protein accession | YP_002548323 |
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| Protein GI | 222147366 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0594] RNase P protein component |
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| TIGRFAM ID | [TIGR00188] ribonuclease P protein component, eubacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0715455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGTCAC TCAAGACATC CAAAACTGTC GGGCGGCTGA AAAGCCGCCC GCAGTTTCTT
GCTGTTCGCG TCGGCGAAAA GCGCAAGGGG CGCTACATTC TCCTCGAAGT GCTGGATCGG
GCCGAACCCG ATACGCCGCC TCGCGTCGGT TTCACCGTCA CGAAAAAGCA TGGCAATGCT
GTTGAGCGCA ATCGTATGCG ACGCCGGTTA AAAGAAGCTG TACGGACTGG CGCGGGCTTT
GCAATGCAGC CCGGACATGA CTATGTGATC GTTGCGCGAC GCGACGTGCT GTCGGCTCCT
TTTGGCGAGC TTCGGGACGT GTTGCAGCGC CGTATTCAAG AAAAATCCAA TGTTCGGCGT
CAAGATACGG CCCGTTCCAG GAAAGTATGA
|
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| Protein sequence | MTSLKTSKTV GRLKSRPQFL AVRVGEKRKG RYILLEVLDR AEPDTPPRVG FTVTKKHGNA
VERNRMRRRL KEAVRTGAGF AMQPGHDYVI VARRDVLSAP FGELRDVLQR RIQEKSNVRR
QDTARSRKV
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