| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0445 |
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| Symbol | trmB |
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| ID | 7388456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 379950 |
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| End bp | 380648 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650100 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_002548315 |
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| Protein GI | 222147358 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.550263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAG ATCGCCGTAG CCGGGCGACC GAAGCCTTTT TCGGTCGTCG CAAGGGAAAG
CCGCTCCGCG ACCAGCAAGT CGAGCGGATG ACCCATCTCC TGCCCGAACG CAAGTTAGAC
TTGGGGTCGG CAGCGCCTGG CGATTTGAAG ACACTGTTTC CTGTGCCGGT GCAGCGCATC
CGCCTGGAAA TCGGCTTTGG TGGGGGCGAA CATCTGGCCC ACCGTGCCAG ACATGATGCC
ACGACCGGCT TTATTGGCGT CGAGCCCTTC GTCAATTCCA TGGCCAAGTT GCTGGCCGTG
ATTGAGGATG AGGGCCTTCC CAATATCCGG GTCTATGACG ATGACGCGAC GCAATTGCTG
GATTGGCTGC CAGCGTCATC GATCGACCAG ATTGATCTTC TCTACGCCGA CCCTTGGCCA
AAGCGCAAGC ATTGGAAGCG CCGTTTCGTC TCGCAGGTCA ACCTGGAGCG GTTTCACCGG
GTGTTGAAAC CAGGCGCAAA TTTCTGCTTC GCCTCTGATA TCGATACCTA CGTGAACTGG
ACGCTGCTGC ATTGCCGCAA CCATGGCGGT TTCGATTGGC TGGCCGAAAG CTCCGCCGAT
TGGTTGACGC CCTACGAGGG CTGGCCAGGC ACGCGCTATG AGGCCAAAGC CCGTCGCGAG
GGCCGTTCAT CGGCTTATTT GACCTTCCGC AGGACCTAA
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| Protein sequence | MTTDRRSRAT EAFFGRRKGK PLRDQQVERM THLLPERKLD LGSAAPGDLK TLFPVPVQRI
RLEIGFGGGE HLAHRARHDA TTGFIGVEPF VNSMAKLLAV IEDEGLPNIR VYDDDATQLL
DWLPASSIDQ IDLLYADPWP KRKHWKRRFV SQVNLERFHR VLKPGANFCF ASDIDTYVNW
TLLHCRNHGG FDWLAESSAD WLTPYEGWPG TRYEAKARRE GRSSAYLTFR RT
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