| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0441 |
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| Symbol | |
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| ID | 7388452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 375110 |
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| End bp | 376147 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650096 |
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| Product | hemolysin |
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| Protein accession | YP_002548311 |
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| Protein GI | 222147354 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.327012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT TTTCGACACG ATCGGCCAGT GAGGCCACGA AGGAGCAGGA CGGCTCCTCC
TCCGAAGAGG GGTCTAGTCC GCAGCGAAGT TCCGCGGCCC ACAAGCCGCA ATCATCTTTC
TGGGCGCGGG CCGCCCGGAT CTTGAAACCC GCCGGCGGCA ATCTGCGTGA GGATATCGCC
GACGCGCTGA TGTCCGACAG GGCCGCTGAG GAGGCCTTTT CCGCCGAAGA GCGGGCGATG
TTGCACAATA TCCTGCGCTT TCGCGAAGTG CGCGTCGAAG ATGTCATGGT GCCGCGCTCC
GATATCCATG CTGTCGATGT CGAGACCAGC ATTGGCGAAT TGATGACCCT GTTCCAGCAA
ACCGGCCATT CGCGCATGCC GGTCTATTGC GACACGCTGG ATGATCCACG CGGCATGGTG
CATATCCGCG ATCTTCTCTC CTATATCACC CTGAAGGCGC TGAACGGCAA CGGCCTCGAC
CTCGCCTGCG TCGATCTTGG CGTGACGCTG GAGGAGGCTG GCATCATCCG CTCCATCCTG
TTCGTGCCAC CGTCCATGCA AGCCTCCGAC CTTCTGGCCC GTATGCAGGC TGCCCGCACC
CAGATGGCGC TGGTGATCGA CGAATATGGC GGCACCGATG GCCTGGTTTC GCATGAAGAT
ATCGTCGAAA TGGTGGTTGG CGACATTGAA GACGAGCACG ACAAGGAAGA GGCGCTGGTC
ACCCGCGTCT CACAGGATGT CTATCTGGCC GATGCCCGCA TCGAACTTGA GGAAATCGCC
GAGGTGATCG GTCCTGATTT CGATATCAGT GCGGAAATCG ATGAAGTCGA TACTCTGGGC
GGATTGCTCT CCACCGCGAT TGGCCGGGTG CCGCAGCGTG GTGAAGTGGT GCAGGCGGTG
GCGGGCTTCG AGCTACATAT TCTCGATGCC GATCCGCGAA GAGTGAAGAA GGTCCGTATC
ACCCGCATGG CACCAATTGC CAAGCGCCTG CAGGAAGGCG CCGATTTGCA GACAGTCGGA
TCCGGGCAGG GTAAGTAG
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| Protein sequence | MSDFSTRSAS EATKEQDGSS SEEGSSPQRS SAAHKPQSSF WARAARILKP AGGNLREDIA
DALMSDRAAE EAFSAEERAM LHNILRFREV RVEDVMVPRS DIHAVDVETS IGELMTLFQQ
TGHSRMPVYC DTLDDPRGMV HIRDLLSYIT LKALNGNGLD LACVDLGVTL EEAGIIRSIL
FVPPSMQASD LLARMQAART QMALVIDEYG GTDGLVSHED IVEMVVGDIE DEHDKEEALV
TRVSQDVYLA DARIELEEIA EVIGPDFDIS AEIDEVDTLG GLLSTAIGRV PQRGEVVQAV
AGFELHILDA DPRRVKKVRI TRMAPIAKRL QEGADLQTVG SGQGK
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