| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0437 |
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| Symbol | miaB |
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| ID | 7388449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 372009 |
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| End bp | 373442 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650093 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_002548308 |
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| Protein GI | 222147351 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.809757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGG AAATTTCAAG CCTTTCAGCA TCGGTAGAGC CGGTGTCCGC CATGGTTGAA
CATGCCTCTG CCCAGCAAAA GCCTGCGCCG CAGAAGAAGG TGTTCATCAA GACCTATGGC
TGTCAGATGA ATGTCTATGA CAGCAGTCGC ATGGCCGATG CGCTGGTGGC TGAAGGCTAT
CAATCGACCG AGGATATGGA GGAGGCCAGC CTCGTGCTGC TCAATACCTG TCATATCCGT
GAAAAGGCCG CCGACAAGGT CTATTCGGCG CTGGGACGGC TGCGTGAAAT GAAAAAGATT
CGCGCCGCAA GAGGCGAGGA ATTCATGATC GGCGTGGCCG GTTGCGTCGC CCAGGCCGAA
GGCGAGGAAA TCGTTCGCCG CGAACCGGGC GTCGATGTCG TTGTCGGTCC GCAGACCTAT
CACCGCCTAC CGCAGGCCTT GAGGCGGGCG CGGGGCGGAG AGCGGGTGGT CGATACCGAT
TATGCCGTGG AAGATAAGTT CGAACATCTG CCCGATCCAA CGAAGATCGC CGGCAAGCGC
CGAATGATCA CGGCGTTTCT GACCGTGCAG GAAGGCTGCG ATAAATTCTG CACCTTCTGT
GTCGTGCCCT ATACCCGTGG GTCCGAGGTT TCCCGGCCGC TTGCTCAATT GTTGGGCGAG
GCGCAGAGGC TGGTGGAAAG CGGTGTGCGC GAAATCACTT TGCTGGGCCA GAACGTCAAT
GCCTGGCACG GCAAGGGGCC GGATGGGCGT GAGATGGGTC TGGGCGATCT TCTTTACAAG
CTTGCCGAAA TTCCGGGTCT TGCCCGGCTA CGCTACACCA CCAGCCATCC GCGTGACATG
GACGAGCGGC TGATCGAGGC GCATCGCGAT CTGCGCATGT TGATGCCTTA TCTGCATCTG
CCGGTACAAT CGGGTTCCGA CCGGATCCTG AAAGCGATGA ACCGCCGGCA TAAGGCTGCG
GATTATATTG CTCTCGTCGA TCGTATCCGG GAGGCGCGGC CTGACATCGC CATATCAGGC
GATTTCATCG TCGGTTTTCC CGGCGAAACC GACGCGGATT TCGAAGACAC AATGAAATTG
GTCGAGCGGA TCGGCTATGC ACAGGCCTTT TCGTTCAAAT ATTCGCCACG TCCAGGCACG
CCTGGCGCCG ACATGCCCGA CCATGTGGCC GAGGACGTCA AGACTGAACG ACTGGCTCGA
TTGCAGGAAC TGTTGTTAAA ACAACAGCAT GACTTTGCCC GCTCGCTGGT GGGGCAGACC
ATGGACCTGC TTCTGGAAAA GCCGGGCCGG ATGCCGGGAC AGATTATTGG CCGGTCTCCG
TGGTTGCAGT CTGTGAATGT TGATGCAAAA CCTTCGCAAA TAGGCGACAT TATTCAGGTA
CGAATCACGG ATATCGGCCC AAACAGCTTG TTTGCCGAGG TGGCAGAGAG TTAG
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| Protein sequence | MTQEISSLSA SVEPVSAMVE HASAQQKPAP QKKVFIKTYG CQMNVYDSSR MADALVAEGY
QSTEDMEEAS LVLLNTCHIR EKAADKVYSA LGRLREMKKI RAARGEEFMI GVAGCVAQAE
GEEIVRREPG VDVVVGPQTY HRLPQALRRA RGGERVVDTD YAVEDKFEHL PDPTKIAGKR
RMITAFLTVQ EGCDKFCTFC VVPYTRGSEV SRPLAQLLGE AQRLVESGVR EITLLGQNVN
AWHGKGPDGR EMGLGDLLYK LAEIPGLARL RYTTSHPRDM DERLIEAHRD LRMLMPYLHL
PVQSGSDRIL KAMNRRHKAA DYIALVDRIR EARPDIAISG DFIVGFPGET DADFEDTMKL
VERIGYAQAF SFKYSPRPGT PGADMPDHVA EDVKTERLAR LQELLLKQQH DFARSLVGQT
MDLLLEKPGR MPGQIIGRSP WLQSVNVDAK PSQIGDIIQV RITDIGPNSL FAEVAES
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