| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0424 |
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| Symbol | glnD |
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| ID | 7388439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 361892 |
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| End bp | 364717 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650083 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_002548298 |
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| Protein GI | 222147341 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGC ACGACCTATC AGACGCAACG CTCCCCGATT TCAAGGCATT GGAGGCGGAA
TGCATGTCCA TCGTGCTGCA GAATGGCAAG GTGCCGGAAA CGCGGGCCGC CATTCTCCCC
TTGTTGAAAA AAGCAAGCAT TGATGGCCGG GAGGCGGCCC TGCGCCATCT GACCACCAAT
GGCAGCGGGT TGGAATGCGC CGGGATGATT TCCAATCTCC AGGACAATCT GATCACGCTG
GTGCATCGCA TGGTCACCCA GGCTGTCTAC CCCACCACCC AGCAGGAATT TGCGGTGGCT
GCGGTCGGCG GTTATGGCCG CAGCACCCTG GCTCCCGGGT CCGACATCGA TCTCCTGTTC
CTGCTGTCGG TCAAGGCCGG AGCGGATGCC CGCAAGGCGG TGGAATTCCT GCTCTATATT
CTCTGGGATC TGGGTTTTAA GGTCGGCCAT GCCACCCGCC TCGTTGAGGA ATGCATCCGG
CTGTCGCGCA CCGACATGAC CATCAGGACC GCCATTCTCG AAACCCGTTT CATCTGCGGG
GAAGCGCTGC TGGTTGGCGA ATTGCAGAAA CGGTTCGATG CGGAGGTGGT TGAAAAGACC
GCGCCTGAAT TCATTGCCGC CAAACTGGCC GAACGTGATG AACGGCACCG CAAGGCGGGC
GATACCCGTT ATCTGGTCGA GCCGAATGTG AAGGAAGGCA AGGGCGGGTT GCGCGATCTG
CACACGCTGT TCTGGATCGC CAAATATTAT TACCGGATTT CCGATCCGGC CGATCTGGTC
AAACTGGGTG TTCTGTCGCG CCAGGAATGG CGGATGTTTC AGAAATCCGA CGATTTTCTC
TGGGCGGTGC GCTGCCATAT GCATTTCGCC ACCGGCAAGC CGGAAGAGCG TCTCTCCTTC
GATCTTCAGC CGGAAATTGC CCGCAATCTC GGCTATAATG CCCGTCCCGG CCTGTCGGAG
GTCGAACGCT TCATGAAGCA TTATTTTCAT GTCGCCAAAA ATGTCGGCGA CCTGACCCGG
ATCGTCTGTG CCAGCCTGGA GGACAAGCAG GCCAAGGCCG CTCCAGGACT GACCGCAGCC
ATTGGGCGTT TTGCCCATCG GCCCCGGCGC ATTCCCGGCA CGCCTGAGTT CATCGAGGAC
AGGGGCCGGA TTGCTCTGTC CGGTCCGGAT ATTTTCAAGC GTGATCCGAT CAATATCATG
CGCTTTTTTC ATGTCGCTGA TCTGCATGGG CTGGAATTCC ATCCCGATGC GCTTAAGGCG
ATTACCCGCT GCCTGCCGCT GATCGATCAT GATTTCCGCG AGAACGAGGA GGCCAACCGG
CTGTTCCTCT CCATCCTGAC ATCCAAACGT GACCCGGCTC TGATGCTGAC CCGGATGAAC
GAAGCGGGCG TTCTGGGCAA GTTCATCCCG GATTTCGGGC GGATCGTTTC GATGATGCAG
TTCAACATGT ATCATCATTA TACCGTGGAC GAGCATTTGA TCCGCTCAGT CGGCATTCTG
GCCGAGGTCG ATCAGGGGCA GCATGCCGAC ATCCATCCGT TGGCCGTCAA GCTGATGCCG
AATATAGAGG AGCGCACTGT TCTGTTTGTC GCGGTGCTGC TGCATGACAT CGCCAAGGGC
CGTCAGGAGG ATCATTCGAT TGCCGGTGCC AAGGTTGCCC GGCGTCTCTG CCCGCGTCTT
GGTTTGAACG ACAAGCAGAC CGAATTGGTG GTCTGGTTGA TTGATCAGCA TCTGCTGATG
TCGATGGTCG CCCAGACCCG CGATCTGCAT GACCGCAAGA CCATTACCGA TTTCGCCGAG
AAGGTGCAGT CGCTTGACAG GCTGCGCATG CTTCTGGTGC TGACGGTCTG CGATATCCGC
GCCGTCGGTC CGGGCGTCTG GAACGGCTGG AAAGGCCAAT TGCTGCGCAC GCTCTATTAT
GAAACCGAAT TGCTGCTATC GGGCGGGTTT TCCGAAAGCC CGCGCAAGGA GCGCGCCAAA
CAGGCCGCCG AGCAATTGGC TGAGGCCCTG TCGGACTGGA GCCAGAAGGA CCAGAAAACC
TATACCAAGC TGCACTATCA ACCCTATCTG CTGACGGTGC CGTTGGAAGA CCAGGTGCGC
CATGCCCATT TTATCCGCCA GGCTGACAAG GCCGATCAGG CGTTGGCAAC CATGGTCCGC
ACCCATTCCT TCCACGCGAT CACCGAGATC ACGGTGCTTG CCCCTGACCA TCCGCGCCTG
TTGTCGATCA TTGCCGGTGC CTGTGCGGCG GCGGGCGCCA ATATTGCCGA TGCGCAGATT
TTTACCACCT CGGATGGCCG GGCGCTCGAT ACCATTCTCA TCAACAGGGA GTTTCCCATT
GACGAGGACG AGATGCGCCG GGCCAATACG ATTAGCAAGA TGATCGAAGA CGTGTTGGCG
GGCAAGAAGC GCCTGCCGGA AGTGATTGCC ACCCGCACCA AGGGCCGCAA ACGCAACAAG
ACCTTCACCG TCAAACCGCA TGTGACGATT TCCAACAGTC TTTCCAATAA GTTTACGGTG
ATCGAGATCG AATGCCTCGA CCGCATTGGT CTGCTGGCCG AGGTCACGGC GGTCCTGGCT
GATCTGTCGC TCGATATTCA CTCGGCCCGT ATCACCACCT TTGGCGAAAA GGTCATCGAT
ACGTTTTACG TCATCGATCT GGTCGGCCAG AAGATCACCA ATGAAAACCG GCAGGGCTCC
ATTTCGGTCA GGCTGAAAGC GGTGATGAGC GAGCAACCCG ACGAATTGCG CGAGCAGATG
CCATCGGGCA TTATCGCGCC CGCCGCGACG AAATCCCCGG CTGCTGAAAA GAAAGCCCGC
GTCTGA
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| Protein sequence | MAKHDLSDAT LPDFKALEAE CMSIVLQNGK VPETRAAILP LLKKASIDGR EAALRHLTTN
GSGLECAGMI SNLQDNLITL VHRMVTQAVY PTTQQEFAVA AVGGYGRSTL APGSDIDLLF
LLSVKAGADA RKAVEFLLYI LWDLGFKVGH ATRLVEECIR LSRTDMTIRT AILETRFICG
EALLVGELQK RFDAEVVEKT APEFIAAKLA ERDERHRKAG DTRYLVEPNV KEGKGGLRDL
HTLFWIAKYY YRISDPADLV KLGVLSRQEW RMFQKSDDFL WAVRCHMHFA TGKPEERLSF
DLQPEIARNL GYNARPGLSE VERFMKHYFH VAKNVGDLTR IVCASLEDKQ AKAAPGLTAA
IGRFAHRPRR IPGTPEFIED RGRIALSGPD IFKRDPINIM RFFHVADLHG LEFHPDALKA
ITRCLPLIDH DFRENEEANR LFLSILTSKR DPALMLTRMN EAGVLGKFIP DFGRIVSMMQ
FNMYHHYTVD EHLIRSVGIL AEVDQGQHAD IHPLAVKLMP NIEERTVLFV AVLLHDIAKG
RQEDHSIAGA KVARRLCPRL GLNDKQTELV VWLIDQHLLM SMVAQTRDLH DRKTITDFAE
KVQSLDRLRM LLVLTVCDIR AVGPGVWNGW KGQLLRTLYY ETELLLSGGF SESPRKERAK
QAAEQLAEAL SDWSQKDQKT YTKLHYQPYL LTVPLEDQVR HAHFIRQADK ADQALATMVR
THSFHAITEI TVLAPDHPRL LSIIAGACAA AGANIADAQI FTTSDGRALD TILINREFPI
DEDEMRRANT ISKMIEDVLA GKKRLPEVIA TRTKGRKRNK TFTVKPHVTI SNSLSNKFTV
IEIECLDRIG LLAEVTAVLA DLSLDIHSAR ITTFGEKVID TFYVIDLVGQ KITNENRQGS
ISVRLKAVMS EQPDELREQM PSGIIAPAAT KSPAAEKKAR V
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