| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0395 |
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| Symbol | rdgB |
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| ID | 7387836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 340808 |
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| End bp | 341452 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650062 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | YP_002548277 |
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| Protein GI | 222147320 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAAC TCGAAACCAG AACCATTGTC GTCGCCAGCC ACAATGCCGG CAAGATCGCT
GAAATCGCCG ACCTGATCGG CCCGTTTGGT TTTACGGCCA AATCGGCCAA GGAGCTTGGC
TTCATCGAGC CGGACGAAAC CGGCACGACA TTCGAGGAAA ACGCCGCCAT CAAGGCGCTG
GCTTCGGCGA AAGCCTCTGG CCTGCCAGCG CTGTCGGACG ATTCCGGCCT GGTTGTCGAT
GCGCTGGATG GTGCGCCGGG CGTCTATACC GCCAATTGGG CCGAGCGCGA GGATGGCAGC
CGCGATTTTG CCATGGCAAT GGAAAAGGTC GAGCATGCCT TGCAGGAAAA AGGCGCGGTG
ACGCAGGAGA GCCGGACGGC TCGTTTTGTC AGCGTGCTGT GTCTGGGCTG GCCCGATGGC
CATACCGAGT TTTTCCGGGG TGAAGTTGAA GGCGTGGTCG CCTGGCCGCC CCGCGGCACC
TCCGGCTTCG GATACGATCC GATCTTCCAG CCAGAGGGGT TTTCGACCAC GTTCGGCGAA
ATGACCTCGG AAGAAAAACA CGGATGGAAG CCGGGCAACG CGCAAGCGCT GTCGCACCGG
GCGCGCGCTT TCAAGCTTTT CGTCGAAACC TGCCTGGGCG CTTGA
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| Protein sequence | MRKLETRTIV VASHNAGKIA EIADLIGPFG FTAKSAKELG FIEPDETGTT FEENAAIKAL
ASAKASGLPA LSDDSGLVVD ALDGAPGVYT ANWAEREDGS RDFAMAMEKV EHALQEKGAV
TQESRTARFV SVLCLGWPDG HTEFFRGEVE GVVAWPPRGT SGFGYDPIFQ PEGFSTTFGE
MTSEEKHGWK PGNAQALSHR ARAFKLFVET CLGA
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