| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0391 |
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| Symbol | dnaA |
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| ID | 7387832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 336131 |
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| End bp | 337705 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650058 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_002548273 |
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| Protein GI | 222147316 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.246214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATGA AGATGGTAAC GGCAAGTGCG GCAGCCAGTG GGGACGAGGC GCGCACGATA
GATCAGGCCG TTAGCCCTGA CGCGACAGGC GGCCCAAATG CGGTGGTAGA CGATACGGTG
GCAGGCGATG AAGTTCGATA CGATGCGCTA TTCGAGCGGT TCAGTGCCCG GCTGAGGGCT
CAGGTCGGCC CGGATGTGTT TGCCAGCTGG TTTGGTCGGT TGAAACTGCA TTCCTCTTCG
AAGAGCGTTA TCCGGCTCAG CGTGCCGACG ACCTTCCTGA AGTCCTGGAT CAACAATCGT
TATCTCGACC TGATTACCTC GATATTCCAG GCGGAAGACG CCAGCATCCT TAAGATCGAA
ATCCTGGTGC GCAGCGCCAG CCGCAATAGC CGGGCGCCGG TTGTCGAAGA CCGTGCCGTC
GAACCCTCCC TGTCGTCTTC CCAGAAGCGT CAGGCGCCGC AAAGCATTGG CCAGATGGCA
CCTGCCATCG CCAATGCCGC AGCACCGCAG CGCGCTCCCG TACAGGGACC GTTGTTCGGC
TCGCCGCTCG ACAGCCGCTA TACGTTCGAT GGTTTCGTCG AAGGCGCCTC CAACCGGGTT
GCCGTTGCTG CCGCCAAGAC CATTGCGGAA GCTGGTGCAG GCGCTGTTCG CTTCAATCCG
CTGTTCATTC ATTCGTCGGT CGGTCTGGGC AAGACGCATT TGCTCCAGGC GATCGCCAAT
GCCGCCATCC ATAGCCCTCG GGCGCCGCGC GTCGTCTATC TGACGGCGGA ATATTTCATG
TGGCGCTTTG CAACCGCCAT CCGCGACAAC GATGCCCTCA CCCTGAAGGA CTCGCTGCGC
AATATCGACC TGCTGATCAT CGACGACATG CAGTTCCTGC AGGGCAAGAC CATCCAGCAT
GAATTCTGCC ATTTGCTCAA CATGCTGCTC GACAGCGCCA AGCAGGTTGT CGTGGCTGCT
GACCGGGCGC CCTGGGAGCT GGAATCGCTT GACCAGCGCG TTCGCTCACG TCTGCAAGGC
GGCGTTGCCA TCGAGATGGA AGCGCCTGAT TACGACATGC GCCTCGACAT GCTGAAGACA
AGGCTGGCGC TGGCCAAGAA AGAAGATCCG AGCCTGGAAA TTCCAGCCGA GATCATCGCC
CATGTCGCCC GCAATGTTGC CAGTTCAGGC CGTGATCTGG AAGGTGCGTT CAACCAGCTG
CTGTTCCGCC GTTCGTTCGA AGCCAATATG ACCATTGAGC GCGTCGATGA GCTGCTGGCC
CATCTGGTCG GTGCTGCCGA GCAGAAGCGG GTTCGCATCG AAGACATTCA GCGTGTTGTT
GCACGCCATT ACAATGTCTC GCGCCAGGAA TTGGTGTCCA ACCGCCGTAC CCGGGTCATC
GTCAAGCCGC GCCAGATCGC CATGTATCTG TCCAAGACCC TGACGCCGCG GTCCTTCCCG
GAAATCGGCC GTCGTTTCGG TGGCCGCGAT CACACCACGG TACTGCATGC CGTGCGCAAG
ATCGAGGAAC TGATCTCCGG CGACCAGAAA TTGTCGCAGG AAATCGAGCT GCTGCGCCGC
TTGATCAACG AGTAA
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| Protein sequence | MQMKMVTASA AASGDEARTI DQAVSPDATG GPNAVVDDTV AGDEVRYDAL FERFSARLRA
QVGPDVFASW FGRLKLHSSS KSVIRLSVPT TFLKSWINNR YLDLITSIFQ AEDASILKIE
ILVRSASRNS RAPVVEDRAV EPSLSSSQKR QAPQSIGQMA PAIANAAAPQ RAPVQGPLFG
SPLDSRYTFD GFVEGASNRV AVAAAKTIAE AGAGAVRFNP LFIHSSVGLG KTHLLQAIAN
AAIHSPRAPR VVYLTAEYFM WRFATAIRDN DALTLKDSLR NIDLLIIDDM QFLQGKTIQH
EFCHLLNMLL DSAKQVVVAA DRAPWELESL DQRVRSRLQG GVAIEMEAPD YDMRLDMLKT
RLALAKKEDP SLEIPAEIIA HVARNVASSG RDLEGAFNQL LFRRSFEANM TIERVDELLA
HLVGAAEQKR VRIEDIQRVV ARHYNVSRQE LVSNRRTRVI VKPRQIAMYL SKTLTPRSFP
EIGRRFGGRD HTTVLHAVRK IEELISGDQK LSQEIELLRR LINE
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