| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0388 |
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| Symbol | ubiE |
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| ID | 7387829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 332845 |
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| End bp | 333621 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650055 |
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| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
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| Protein accession | YP_002548270 |
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| Protein GI | 222147313 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0943127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTCGCAA GCCGCACCTC CGCCGATGGC GGCATGGAAA CCTCCTACGG CTTCCGCGAT
GTGGCGGAAG GCGAAAAGCA AGGTCTTGTC AACGACGTGT TCCACAAGGT TGCCAAGCGC
TACGACATCA TGAACGACGT GATGTCGGCC GGCATGCACC GGGTTTGGAA GGATGCGCTG
ATTGCCGCGC TCAACCCGCG TAAGGATGCA GGCTACAAGG TGCTGGACGT GGCCGGCGGC
ACGGGCGATA TCGCCTTTCG CATCATCGAG GCCTCGCGCA GGCTTGCCCA TGCCACCGTG
CTCGATATCA ACGGCTCCAT GCTGGGTGTC GGCCAGGAGC GAGCCCAGAA AAAAGGCCTC
TCCGACAATC TCACCTTCGT CGAGGCCAAT GCCGAGGCCC TGCCCTTCGA AGCAAACCAA
TTCGACGCCT ATACGATCGC CTTTGGTATT CGCAACGTGC CCCGCATCGA TGTCGCGCTG
AGCGAGGCCT ACCGCGTGCT GAAACGCGGC GGGCGCCTTC TGGTGCTGGA ATTTTCCGAG
GTGCAGATGC CGCTGCTGGA TCGCTTTTAC GATCAATGGT CATTCAAGGC GATCCCACGG
TTCGGCAAGA TGATCACCGG TGAGGCCGAG CCCTATCAAT ATCTGGTGGA ATCGATCCGC
AAATTCCCCA ATCAGCAGGA TTTTGCCGCG ATGATCACCA AGGCGGGCTT TTCCAAGGTG
TCCTTCACCA ACTACACTGG CGGCATTGCC GCCCTCCATT CCGGCTGGAA GATCTGA
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| Protein sequence | MVASRTSADG GMETSYGFRD VAEGEKQGLV NDVFHKVAKR YDIMNDVMSA GMHRVWKDAL
IAALNPRKDA GYKVLDVAGG TGDIAFRIIE ASRRLAHATV LDINGSMLGV GQERAQKKGL
SDNLTFVEAN AEALPFEANQ FDAYTIAFGI RNVPRIDVAL SEAYRVLKRG GRLLVLEFSE
VQMPLLDRFY DQWSFKAIPR FGKMITGEAE PYQYLVESIR KFPNQQDFAA MITKAGFSKV
SFTNYTGGIA ALHSGWKI
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