| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0377 |
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| Symbol | |
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| ID | 7387819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 322649 |
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| End bp | 323560 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650045 |
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| Product | pirin protein |
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| Protein accession | YP_002548260 |
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| Protein GI | 222147303 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.107819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATTC GCCCCGTCAA ACACGAAAGT CGCGCCACGC CCACCATGGA AGGGGCCGGT
GTCAAGCTGC ACCGCGTCTT CGGCTTCGGC GATCCCTCGA TGACTGATCC GTTCCTGATG
ATGGACGATT TTCGCAATGA TGATCCGCAG GATTATATCC GCGGCTTTCC CTGGCATCCG
CATCGCGGTA TCGAAACCAT CACCTATGTT CTGGCCGGAA CGGTGGACCA TGGCGACAGC
CTCGGCAATC ATGGCCAGCT TGGCGCAGGC GACCTTCAGT GGATGACGGC AGGTAGCGGC
ATCATGCATC AGGAAATGCC GAAGGGCGAT TTTTCCGGCA AGATGCATGG CTTCCAGCTC
TGGGCCAACT TGCCCTCCTC GCTGAAAATG ACTGCGCCGC GCTATCAGGA TATCAAATCC
GCCGACATTC CTGTCGTGGT CGATGACGAC GGTACGGCGG TGCGGGTGAT CAGCGGCGAT
TTCTGGGGCA AATCCGGCCC GGTCGATGGC ATTGCCGCAG AGCCTGTTTA TCTCGATATC
TCCGTTCCAC CCGGCAAGAC CAAGCGTTTT CCTGTCGATA CCTATCGGTC GGCCTTTGCC
TATATTTTCG CGGGCTCCGG CTCGTTCCGC GATGCCTCCA AGCCGTTCGG TGTCAAAGTC
GAGAAAGAAT TTCAGGGCGA AGAACTGAAT ATCCGTGACC TCTCGGGCAA TCGCACGCTG
GTGGTCTTTG ATACCGGCGA CGAAATCACC GTTCAGGCTG GTGAAAAGGG TATCCGCTTC
CTGCTGGTGA CCGGCAAGCC GATCAAGGAG CCGGTCGCCT GGCATGGACC AATCGTCATG
AACAGCCGGG AAGAGCTGAT GGAGGCCATG CGCGAATTGA AGAACGGCAC CTTCATCAAG
GCCGATCATT GA
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| Protein sequence | MSIRPVKHES RATPTMEGAG VKLHRVFGFG DPSMTDPFLM MDDFRNDDPQ DYIRGFPWHP
HRGIETITYV LAGTVDHGDS LGNHGQLGAG DLQWMTAGSG IMHQEMPKGD FSGKMHGFQL
WANLPSSLKM TAPRYQDIKS ADIPVVVDDD GTAVRVISGD FWGKSGPVDG IAAEPVYLDI
SVPPGKTKRF PVDTYRSAFA YIFAGSGSFR DASKPFGVKV EKEFQGEELN IRDLSGNRTL
VVFDTGDEIT VQAGEKGIRF LLVTGKPIKE PVAWHGPIVM NSREELMEAM RELKNGTFIK
ADH
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