| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0371 |
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| Symbol | |
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| ID | 7387815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 319516 |
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| End bp | 320316 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650041 |
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| Product | Trehalose-6-phosphatase protein |
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| Protein accession | YP_002548256 |
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| Protein GI | 222147299 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.501795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACC AGCAATCGGC AATCAAGCGA TCGCCAGCGC GAACCGAACA AAAAGACGCA
GCAGCGCTGC TGTTTGATCT TCTTCAGGCC GAGCCTCACC GCTACGCATT GTTTCTCGAT
ATTGATGGTA CCTTGCTGGA TCTTGCCGAG AGCCCGGATG GTATCCGTGT GCCGGTTGGT
CTGGCAGACG ATCTGGCCGC CCTGTCAGGA CGCATGGGCG GGGCACTTGC TCTCGTGACC
GGGCGGGCCT TGGCCTATGC TGACCGGCTG TTTGCGCCAA AGCACTTCCC GATTGCCGGA
TTACACGGCA CCGAGCGGCG AACGGTTGAA GGCACCATCA TCCGCAGTGA GCCGAGCCCG
GCTTTTCTGG CTGTCAAGGA AGAGCTTCCG AAGCTCGAAC AGGCCTGGCC GGGCGTGCTG
GTCGAGGACA AGGGTGCCGC CATCGCCGTT CACTATCGCC AGGCGCCCGC CTGCGCCGAC
GTGGTGGAGA AAGCCATGGC GGATGCCTTT AAGGCGGCAG GTCCCGGCTA TGAGCTGCAA
CGCGGCAAGA TGGTCGTCGA AATCCGCCCT GACAGTGCCG ACAAGGGCCG GGCCTTGCAG
TCCTATCTGG CCGAGCCGCC TTTCACCGAC CGTGTTGCCA TCGCCATTGG TGACGACGTG
ACCGACGAGG CGATGTTTGA ATGCGTCAAC CGCTTGGGCG GCCTGTCGAT CCGCGTCGGC
GATCTCGAAG GAAGCGTGGC CAGCCAGTCT CTGGCAAGCC CTCAGCTCCT GCGTGACACG
CTGGCCAGAT TGGCCCGCTA A
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| Protein sequence | MENQQSAIKR SPARTEQKDA AALLFDLLQA EPHRYALFLD IDGTLLDLAE SPDGIRVPVG
LADDLAALSG RMGGALALVT GRALAYADRL FAPKHFPIAG LHGTERRTVE GTIIRSEPSP
AFLAVKEELP KLEQAWPGVL VEDKGAAIAV HYRQAPACAD VVEKAMADAF KAAGPGYELQ
RGKMVVEIRP DSADKGRALQ SYLAEPPFTD RVAIAIGDDV TDEAMFECVN RLGGLSIRVG
DLEGSVASQS LASPQLLRDT LARLAR
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