| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0370 |
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| Symbol | |
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| ID | 7387814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 318083 |
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| End bp | 319486 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650040 |
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| Product | OtsA trehalose-6-phosphate synthase protein |
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| Protein accession | YP_002548255 |
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| Protein GI | 222147298 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0630943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAC TTGTTGTGGT TTCCAACCGT GTTCCCGTAC CCGACAAGAC CAATAAGGCG
CCGGCGGGAG GTTTGGCCGT CGCGTTGCGC GCTGCCCTTG AGGACAAGGG CGGCATCTGG
ATGGGCTGGT CGGGCGTCTC CAGCGGCGAG GAAGAAGCCG GTGAGCTTGC GATGATCGAG
GATGGCAAGA TCACCTACGC CCTGACTGAT CTAACCGACC GCGATGTCGA TGAATATTAT
CACGGCTTTG CCAACCGCGT GCTGTGGCCA ACGTTTCACT ACCGCCTTGA CCTGACCGAT
TATGCCCGCA AGGACATGAC CGGCTATTTC AGGGTCAACC GGTTTTTTGC CGAGAGGCTC
GTGCCGCTGC TGAAGCCCGA TGATACGATC TGGGTTCAGG ATTATCATCT GATCCCGCTG
GCCAAGGAAT TGCGGCAGAT GGGCGTGAAG AACCGGATCG GTTTCTTCCT GCACATCCCG
CTTCCGCCCG CCGATGTGCT GTTTGCCATG CCGGTCTATG AAACACTGAT CGAAAGCCTG
GCCCATTACG ATCTGGTCGG CTTCCAGACT GATTTCGACC ATGCCAATTT CGTCGGAGCT
CTTGTACGCG AGGGGATTGG CGAGGCGATC TCGGGCAACA AGATCAAATC CCATGACCGG
ACGTTTAAGG CGGGCCACTA TCCGATTGGC ATTGAGACAG CGGCCTTTGC CGCCTATGCG
CGCCGCGCCG TGCGCAACGT GATGGTGAAG CGCGCCGCGC AAAGCATTGA AGGCAAGGCA
TTGGTAATCG GCGTCGACCG GCTGGATTAT TCCAAGGGCC TGACCCAGCG GCTGGATGCC
TATGAGCATT TCATCAATGC CAATCCGAAC TATCAGGGCA AGGTGACCTA TTTGCAGATC
ACCCCGAAAT CCCGCTCTGA AGTGCCGGAA TATGAGGCCA TGCAGCGCAC CGTGGCCGAA
CAGGCCGGGC GCGTGAATGG CGCGCTGGGC ACGGTGGATT GGGTGCCGAT CCGCTATATG
ACCCGCTCGG TGGCACGTCC GGTGCTGGCT GGGCTCTATC GGCTGGCCAA GGTCGGGCTG
GTGACGCCGA TGCGTGACGG CATGAACCTG GTTGCCAAGG AATATGTTGC CGCCCAGGAC
CCCGATGATC CCGGCGTTCT CGTCCTGTCA CGCTTTGCCG GGGCCGCCCG CGAGCTGAAA
GGGGCCTTAC TGGTCAATCC ATACGACACG GAAGGCACAG CCCAGGCCAT TGCCCGCGCC
CTCGATATGC CACTTGCCGA GCGCCAGCAA CGCTGGAAGG GCATGATGGA CCATCTGCTG
GTCAACGATG TCAACCATTG GTGTGACACG TTCCTGTCGG ATCTGATGGA AATGCCAACA
GAAAAGACTG CCGAAGCGGC GTAA
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| Protein sequence | MSRLVVVSNR VPVPDKTNKA PAGGLAVALR AALEDKGGIW MGWSGVSSGE EEAGELAMIE
DGKITYALTD LTDRDVDEYY HGFANRVLWP TFHYRLDLTD YARKDMTGYF RVNRFFAERL
VPLLKPDDTI WVQDYHLIPL AKELRQMGVK NRIGFFLHIP LPPADVLFAM PVYETLIESL
AHYDLVGFQT DFDHANFVGA LVREGIGEAI SGNKIKSHDR TFKAGHYPIG IETAAFAAYA
RRAVRNVMVK RAAQSIEGKA LVIGVDRLDY SKGLTQRLDA YEHFINANPN YQGKVTYLQI
TPKSRSEVPE YEAMQRTVAE QAGRVNGALG TVDWVPIRYM TRSVARPVLA GLYRLAKVGL
VTPMRDGMNL VAKEYVAAQD PDDPGVLVLS RFAGAARELK GALLVNPYDT EGTAQAIARA
LDMPLAERQQ RWKGMMDHLL VNDVNHWCDT FLSDLMEMPT EKTAEAA
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